Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC008481.1-201ENST00000463278 396 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 NIPA2P2-201ENST00000496376 1083 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 VN1R104P-201ENST00000505115 1009 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC017037.1-201ENST00000508460 471 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 RNU6-1220P-201ENST00000517126 108 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC100870.1-201ENST00000522035 505 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC123904.3-201ENST00000547218 814 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AL845331.3-202ENST00000562856 261 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AL606834.2-201ENST00000602954 668 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 AC004696.1-201ENST00000614345 607 ntBASIC3.82□□□□□ -1.8
HMGB4Q8WW32 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGB4Q8WW32 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC005832.2-201ENST00000538921 1430 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 MFSD8-236ENST00000641509 4050 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 Y_RNA.6-201ENST00000362350 114 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 RNU6-181P-201ENST00000363225 107 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 RNU6-1103P-201ENST00000384150 107 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 MTCO2P11-201ENST00000431069 680 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AL138799.3-201ENST00000438968 350 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC132479.1-201ENST00000449160 144 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 RPL23AP31-201ENST00000456160 467 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AL049714.1-201ENST00000466686 347 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 HMGB1P29-201ENST00000505659 499 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC026427.2-201ENST00000506228 536 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 RNU6-445P-201ENST00000516949 107 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC011979.2-201ENST00000527568 352 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AP003072.2-201ENST00000527756 676 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 OR5D17P-201ENST00000531492 978 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 MED28P6-201ENST00000558776 231 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC006116.10-201ENST00000591836 581 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AP001330.4-201ENST00000604350 154 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC012603.1-201ENST00000606424 528 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AL592295.2-201ENST00000612578 206 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC073534.2-201ENST00000620377 381 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 LRRC77P-213ENST00000637727 880 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC119674.1-207ENST00000641355 633 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 AC073346.2-201ENST00000624724 2058 ntBASIC3.81□□□□□ -1.8
HMGB4Q8WW32 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGB4Q8WW32 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 MTND5P1-201ENST00000445440 1375 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AC138915.3-201ENST00000562908 1389 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 RNY1P12-201ENST00000364251 105 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 RNU6-517P-201ENST00000384362 110 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 RNVU1-14-201ENST00000384770 164 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 PTMAP5-201ENST00000393073 333 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGB4Q8WW32 OR2B8P-201ENST00000432841 938 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
HMGB4Q8WW32 AL451074.3-201ENST00000437709 472 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms