Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL354719.1-201ENST00000406535 843 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 MTCO3P12-201ENST00000416718 547 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC098614.3-201ENST00000438957 440 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC114755.5-201ENST00000447760 831 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 RPL39P36-201ENST00000490784 156 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC025465.4-201ENST00000513422 638 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 RNU6-875P-201ENST00000516488 106 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 IGKV2D-23-201ENST00000518179 286 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 OR4R3P-201ENST00000525084 838 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 FGF7P1-201ENST00000582820 288 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 UBE2V2P2-201ENST00000587677 504 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 IGHV3-29-201ENST00000604817 344 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AL034351.1-201ENST00000605288 668 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 RNA5SP108-201ENST00000605921 117 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC008945.2-201ENST00000606056 604 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AL121992.2-201ENST00000606262 256 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 DISC2.1-201ENST00000612827 205 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AL136313.1-201ENST00000624804 202 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC090337.1-201ENST00000579651 2074 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC116667.1-201ENST00000604855 2072 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AC106871.1-201ENST00000568324 3102 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 EXOC5P1-201ENST00000510543 1969 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 AL645937.1-201ENST00000641739 1652 ntBASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.29□□□□□ -1.72
CCHCR1Q8TD31 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MTND4P12-201ENST00000498999 1377 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RPL7P26-201ENST00000333817 754 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNU1-14P-201ENST00000362759 152 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MIR135A2-201ENST00000384854 100 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AL583834.1-201ENST00000406943 343 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNA5SP36-201ENST00000410197 133 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNU6-712P-201ENST00000410558 100 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNA5SP107-201ENST00000411358 122 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RPL23AP26-201ENST00000412728 464 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AL137014.1-201ENST00000420490 1226 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC011742.1-201ENST00000431448 434 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AL138799.3-201ENST00000438968 350 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MTND4LP16-201ENST00000440828 295 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RPS20P20-201ENST00000460498 340 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC109327.1-201ENST00000471666 403 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC126389.1-201ENST00000477436 290 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC233702.1-201ENST00000482905 502 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 NIPA2P2-201ENST00000496376 1083 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 HMGN1P12-201ENST00000499125 195 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MTCO2P30-201ENST00000503662 364 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MTCO1P35-201ENST00000515270 228 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNA5SP401-201ENST00000515920 127 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNA5SP49-201ENST00000516450 115 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 RNU7-51P-201ENST00000516560 62 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 CENPUP1-201ENST00000526649 1202 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 ARL2BPP2-201ENST00000550907 489 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 OR4K8P-201ENST00000578842 1048 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC010591.1-201ENST00000603941 649 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AL354950.2-201ENST00000617939 290 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 AC244205.2-202ENST00000635781 342 ntBASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.28□□□□□ -1.72
CCHCR1Q8TD31 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CCHCR1Q8TD31 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms