Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 BTF3P6-201ENST00000448054 499 ntBASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 RPL29P29-201ENST00000448725 423 ntBASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 MTCO3P2-201ENST00000457365 171 ntBASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC134882.1-201ENST00000603738 1676 ntBASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 ZFRP1-201ENST00000457579 2970 ntBASIC5.61□□□□□ -1.51
NEDD1Q8NHV4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC011460.1-201ENST00000636268 1834 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 RBPJP2-201ENST00000618187 1444 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 MIR411-201ENST00000362239 96 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 RNU6-1287P-201ENST00000362914 107 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 RNA5SP443-201ENST00000363083 132 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 RNU6-611P-201ENST00000384276 104 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 RNU6-1060P-201ENST00000384664 107 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AL590290.1-201ENST00000405336 380 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 RN7SKP216-201ENST00000411050 312 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC245028.1-201ENST00000423259 256 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 FTH1P2-201ENST00000466086 412 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC104806.1-201ENST00000508720 308 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 SNORA14.1-201ENST00000516113 141 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 HMGN1P28-201ENST00000521340 364 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 BX284668.6-201ENST00000606899 438 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 AC093849.1-201ENST00000563631 2209 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 MAPK10-328ENST00000641553 4009 ntBASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
NEDD1Q8NHV4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 RNU4-50P-201ENST00000364361 141 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 MIR19A-201ENST00000384878 82 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 RNU1-82P-201ENST00000390851 165 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 RN7SKP222-201ENST00000410651 315 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 CYCSP34-201ENST00000458172 304 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 RNU7-27P-201ENST00000459281 62 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 RN7SL738P-201ENST00000470264 297 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AP000893.1-201ENST00000474462 794 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AC110792.1-201ENST00000491826 472 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AC105129.1-201ENST00000560250 297 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 MIR3941-201ENST00000582572 103 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 MIR4660-201ENST00000583549 74 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AC017100.2-201ENST00000584628 355 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AC006363.1-201ENST00000603806 463 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AC002044.1-201ENST00000606707 158 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AP000346.3-201ENST00000622821 210 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AP000843.1-201ENST00000624880 701 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 HSPA8P1-201ENST00000425843 1833 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 EIF2AP4-201ENST00000424793 1781 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AL022311.1-201ENST00000623726 19416 ntBASIC5.59□□□□□ -1.51
NEDD1Q8NHV4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.59□□□□□ -1.52
NEDD1Q8NHV4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD1Q8NHV4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NEDD1Q8NHV4 BDP1P-201ENST00000582658 1990 ntBASIC5.58□□□□□ -1.52
NEDD1Q8NHV4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.58□□□□□ -1.52
NEDD1Q8NHV4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.58□□□□□ -1.52
NEDD1Q8NHV4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NEDD1Q8NHV4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NEDD1Q8NHV4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms