Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC008481.1-201ENST00000463278 396 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 MIR4504-201ENST00000577413 92 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 MIR5186-201ENST00000577504 120 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC245014.2-201ENST00000603689 287 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC115621.1-201ENST00000604653 858 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC246785.4-201ENST00000605374 287 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AL132765.2-201ENST00000610812 351 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 AC068722.2-201ENST00000618734 544 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 MIR8057-201ENST00000620957 69 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE4Q8N205 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SYNE4Q8N205 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNE4Q8N205 PHKBP1-201ENST00000450951 1951 ntBASIC4.53□□□□□ -1.68
SYNE4Q8N205 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 RNU4-35P-201ENST00000362588 141 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 RNY3P3-201ENST00000363816 102 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AL356432.1-201ENST00000405809 419 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 MIR1305-201ENST00000408300 86 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 OR9R1P-201ENST00000412200 877 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AF228730.4-201ENST00000421457 183 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AL353597.2-202ENST00000434901 373 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 SKP1P1-201ENST00000438081 489 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC105402.2-201ENST00000438503 358 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 RPS15AP9-201ENST00000439856 381 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC006480.1-201ENST00000449887 378 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 FAM172BP-201ENST00000487497 1089 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC010493.1-201ENST00000513479 292 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 RNU6-1003P-201ENST00000517099 105 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 HMGB1P19-201ENST00000517578 577 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC104986.1-201ENST00000517978 436 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 SUMO2P20-201ENST00000520803 283 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AP003072.1-201ENST00000531740 145 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC107918.3-201ENST00000533272 382 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC008127.2-201ENST00000549925 1075 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC011611.1-201ENST00000552179 197 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC078814.3-201ENST00000553036 491 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC034105.3-201ENST00000565294 442 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 TPMTP1-201ENST00000592307 737 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC068790.5-201ENST00000602741 355 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC012507.3-201ENST00000603556 477 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 YPEL5P2-201ENST00000605553 359 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 MIR98-201ENST00000606724 119 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 AL391813.2-201ENST00000609113 322 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 MIR6864-201ENST00000617935 70 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SYNE4Q8N205 AC107027.3-201ENST00000565095 3473 ntBASIC4.52□□□□□ -1.69
SYNE4Q8N205 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
SYNE4Q8N205 OR11H5P-202ENST00000641612 1325 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AL365361.1-201ENST00000566942 3481 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 Y_RNA.46-201ENST00000362695 102 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 Y_RNA.326-201ENST00000365176 113 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE4Q8N205 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE4Q8N205 ARF4P3-201ENST00000397387 509 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 EIF5P1-201ENST00000400019 1231 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SYNE4Q8N205 RPL7P25-201ENST00000404151 721 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 AC017083.1-201ENST00000428093 483 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AC087650.1-201ENST00000431445 468 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 RPL23AP20-201ENST00000447965 421 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 SNRPGP6-201ENST00000451124 220 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 U3.44-201ENST00000458938 192 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 RPS3AP50-201ENST00000487064 803 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AC139783.2-201ENST00000504847 1145 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 HMGN1P13-201ENST00000505795 138 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.51□□□□□ -1.69
SYNE4Q8N205 FGF7P4-201ENST00000509595 295 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 RNU6-1220P-201ENST00000517126 108 ntBASIC4.51□□□□□ -1.69
SYNE4Q8N205 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms