Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS52Q8N1B4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS52Q8N1B4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.78
VPS52Q8N1B4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS52Q8N1B4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 RNU2-47P-201ENST00000410649 186 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 RPL30P2-201ENST00000414021 291 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 ARF4P2-201ENST00000430209 526 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 MTND4LP10-201ENST00000435146 291 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC009961.2-201ENST00000435771 251 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 UBE2V1P13-201ENST00000436983 439 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 RPL37P25-201ENST00000507308 276 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 RNU6-528P-201ENST00000516926 100 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC008011.1-201ENST00000545989 227 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC060771.1-201ENST00000582031 164 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC006116.10-201ENST00000591836 581 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC073648.5-201ENST00000603502 305 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC004492.1-201ENST00000607036 742 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC008121.2-201ENST00000614647 523 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC018755.4-201ENST00000619715 454 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC099842.1-201ENST00000619919 596 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 AC095031.1-201ENST00000623685 672 ntBASIC3.9□□□□□ -1.79
VPS52Q8N1B4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
VPS52Q8N1B4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 FARSBP1-201ENST00000435808 1778 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 CEP170P1-201ENST00000502249 4587 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RNU6-1042P-201ENST00000384204 107 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 Y_RNA.582-201ENST00000391023 95 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RNU6-712P-201ENST00000410558 100 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 DNAJC19P4-201ENST00000440115 345 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 NPM1P49-201ENST00000448027 714 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 GAPDHP17-201ENST00000449858 1001 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RPL21P10-201ENST00000463521 490 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RN7SL601P-201ENST00000471221 293 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RPL23AP41-201ENST00000484754 458 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC055855.1-201ENST00000489563 579 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC138853.1-201ENST00000503549 823 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC026784.1-201ENST00000507986 352 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AP003392.2-201ENST00000527269 208 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 CR383656.7-201ENST00000548164 174 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 NCAPGP2-201ENST00000557911 754 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC009063.1-201ENST00000563342 702 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 MIR5047-201ENST00000579212 100 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 CKS1BP3-201ENST00000600888 237 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC012669.1-201ENST00000603209 283 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC006254.3-201ENST00000603353 884 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC011468.4-201ENST00000603942 409 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 HMGN2P28-201ENST00000606102 262 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RNU6-87P-201ENST00000607561 108 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC103710.1-201ENST00000610003 901 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AL355365.1-201ENST00000616480 294 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 MIR3651-201ENST00000630427 90 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 AC002546.1-201ENST00000588041 2504 ntBASIC3.89□□□□□ -1.79
VPS52Q8N1B4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS52Q8N1B4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL645937.1-201ENST00000641739 1652 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 Y_RNA.41-201ENST00000362646 102 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 U8.3-201ENST00000363321 132 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AP000567.1-201ENST00000406413 156 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 FCF1P10-201ENST00000407590 479 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 HMGB3P23-201ENST00000414981 585 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 MTCO1P21-201ENST00000416634 589 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AC244098.2-201ENST00000422068 99 ntBASIC3.88□□□□□ -1.79
VPS52Q8N1B4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS52Q8N1B4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms