Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AL138895.2-201ENST00000603019 178 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AC108706.1-201ENST00000611053 297 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AC000095.2-202ENST00000637415 154 ntBASIC5.4□□□□□ -1.54
CCDC116Q8IYX3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CCDC116Q8IYX3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC083843.3-201ENST00000623679 2186 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 UBE2L2-201ENST00000254302 429 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 RNU1-150P-201ENST00000362491 162 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 RNU6-1301P-201ENST00000362724 104 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 RN7SKP224-201ENST00000364140 325 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 SNORA22C-201ENST00000384614 134 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 RPL23AP36-201ENST00000413895 458 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AL117339.3-201ENST00000418733 162 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 OR6D1P-201ENST00000436165 939 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AL163193.1-201ENST00000444895 788 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 RPS23P2-201ENST00000463671 415 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC010683.1-201ENST00000473673 378 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC074255.1-201ENST00000511259 501 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 GMPSP1-201ENST00000514075 579 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC074133.1-201ENST00000515696 183 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 SNORA31.22-201ENST00000517204 135 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 H3F3AP1-201ENST00000559984 334 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC007448.1-201ENST00000582714 234 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 MIR4282-201ENST00000583613 67 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AL499605.1-201ENST00000604628 403 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 AC007938.2-201ENST00000604666 2634 ntBASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC116Q8IYX3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC104964.3-201ENST00000606115 2860 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 PCAT14-202ENST00000627127 3935 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC004817.4-201ENST00000602396 3625 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AL159987.1-201ENST00000347911 293 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RNA5SP52-201ENST00000362448 134 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RNU6-384P-201ENST00000364900 104 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RNU6-395P-201ENST00000365662 106 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RNA5SP122-201ENST00000384457 108 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 MIR130A-201ENST00000385274 89 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC005522.1-201ENST00000395416 346 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RNU4-78P-201ENST00000410940 126 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AL358453.1-201ENST00000422522 250 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RPL21P40-201ENST00000428586 483 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 MTCO1P5-201ENST00000433573 344 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AL356981.1-201ENST00000454879 684 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 Y_RNA.638-201ENST00000459374 113 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC005363.1-201ENST00000530779 351 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC107918.3-201ENST00000533272 382 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AC090617.3-201ENST00000573670 475 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 RN7SL753P-201ENST00000581238 290 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 COX6CP7-201ENST00000597056 208 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 SNORD113-5-201ENST00000607261 78 ntBASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC116Q8IYX3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms