Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL590099.1-201ENST00000615276 138 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC093908.1-201ENST00000623125 8092 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AC097655.1-201ENST00000635075 318 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 AL035425.3-201ENST00000564206 4996 ntBASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC60Q8IWA6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 RNU6-97P-201ENST00000363387 104 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 RPS3AP26-201ENST00000398259 784 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 RNU4-72P-201ENST00000410754 173 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 HMGB1P11-201ENST00000413899 637 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 USP9YP26-201ENST00000421008 661 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 MTND4P20-201ENST00000424125 869 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 UBE2FP3-201ENST00000436366 524 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 MTCYBP39-201ENST00000437562 491 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 BZW1P2-201ENST00000473537 826 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AP001025.2-201ENST00000490908 477 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC013828.2-201ENST00000532487 235 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC136618.2-201ENST00000575091 400 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 OR4K8P-201ENST00000578842 1048 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC090616.2-202ENST00000584248 222 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC097468.3-201ENST00000607956 456 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AC092192.1-201ENST00000633154 1018 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 AL353746.1-201ENST00000566293 6881 ntBASIC3.29□□□□□ -1.88
CCDC60Q8IWA6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 Y_RNA.111-201ENST00000363248 100 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 RNU6-853P-201ENST00000364306 107 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 SNORA18.3-201ENST00000384122 132 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AL049545.1-201ENST00000401856 572 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 DUTP6-201ENST00000425573 462 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 FTH1P1-201ENST00000437933 532 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 RPL30P9-201ENST00000465586 330 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC083906.5-201ENST00000503722 328 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC017037.2-201ENST00000513850 890 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC087276.1-201ENST00000529659 480 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC007954.1-201ENST00000554198 494 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AL353997.4-201ENST00000586196 166 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AL109653.1-201ENST00000603091 248 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 MIR7106-201ENST00000612419 65 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC004223.4-201ENST00000612426 332 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 AC099063.3-201ENST00000642066 185 ntBASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC60Q8IWA6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AC092326.2-201ENST00000624772 1561 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 FRG1BP-201ENST00000278882 761 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 AL672167.1-206ENST00000356293 943 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.27□□□□□ -1.89
CCDC60Q8IWA6 Y_RNA.548-201ENST00000384656 105 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms