Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RPS3AP37-201ENST00000419176 745 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 OR4K11P-201ENST00000431829 904 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 EEF1A1P39-201ENST00000440791 250 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC002381.1-201ENST00000447049 280 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 ZNF886P-201ENST00000450781 723 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 FCF1P6-201ENST00000456841 595 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RNU6-150P-201ENST00000516237 95 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RN7SKP57-201ENST00000517248 293 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC026241.1-201ENST00000517873 2142 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 DEFB131D-201ENST00000526803 184 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC123904.3-201ENST00000547218 814 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 CYCSP2-201ENST00000558168 301 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 MTCYBP23-201ENST00000558717 1102 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 RPL23AP78-201ENST00000599928 470 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 BBIP1P1-201ENST00000602999 279 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 DUXAP3-201ENST00000603616 594 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC011451.2-201ENST00000604303 598 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC012468.1-201ENST00000604888 430 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC007179.3-201ENST00000604976 235 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC131235.4-201ENST00000609288 620 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC096577.2-201ENST00000611455 153 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC090132.2-201ENST00000615881 347 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 AC002550.2-201ENST00000621246 394 ntBASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.64□□□□□ -1.99
NUDCD3Q8IVD9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MIR422A-201ENST00000362286 90 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MIR620-201ENST00000385232 95 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AL136310.1-201ENST00000404926 654 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 RNU4-22P-201ENST00000411058 166 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MTATP6P20-201ENST00000414147 562 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 BX119904.4-201ENST00000424402 301 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AL512649.1-201ENST00000428997 581 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 OR10R1P-201ENST00000441524 1141 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 snoU109.3-201ENST00000459477 145 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 HSPE1P6-201ENST00000479457 291 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC147055.4-201ENST00000504399 745 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 RNU6-714P-201ENST00000516963 103 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC100870.1-201ENST00000522035 505 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MTCO1P47-201ENST00000523889 1271 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 OR6C7P-201ENST00000547875 934 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 OR4K7P-201ENST00000580232 945 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MIR3609-201ENST00000582661 80 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AL158211.4-201ENST00000606988 584 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC004067.1-201ENST00000608733 700 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AC140725.3-201ENST00000616193 880 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MIR6130-201ENST00000619419 109 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 AL390862.1-201ENST00000635467 1469 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 MTCO1P9-201ENST00000505577 1534 ntBASIC2.63□□□□□ -1.99
NUDCD3Q8IVD9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC005832.2-201ENST00000538921 1430 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 RNA5SP374-201ENST00000362939 125 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 RNU6-621P-201ENST00000364752 109 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 SNORD116.1-201ENST00000365628 92 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 MIR1290-201ENST00000408735 78 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 VN1R51P-201ENST00000411675 945 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 PPP1R11P2-201ENST00000423543 382 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 EXOSC3P1-201ENST00000448649 500 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 MTND1P16-201ENST00000465177 898 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 RPL30P9-201ENST00000465586 330 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 AL049874.1-201ENST00000489560 388 ntBASIC2.62□□□□□ -1.99
NUDCD3Q8IVD9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms