Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 Y_RNA.169-201ENST00000363745 96 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RNU6-553P-201ENST00000364047 96 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RNU6-1074P-201ENST00000383995 104 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RNU6-1207P-201ENST00000384343 107 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RNY3P9-201ENST00000384727 106 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 U3.26-201ENST00000391236 204 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 UBA52P6-201ENST00000399822 382 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL356421.1-201ENST00000403255 413 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 MTND2P18-201ENST00000419962 1030 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL353678.1-201ENST00000422735 741 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 DUTP6-201ENST00000425573 462 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RPL21P66-201ENST00000426566 466 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 OR6K5P-201ENST00000447050 945 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AP000542.1-201ENST00000448473 371 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AP001025.2-201ENST00000490908 477 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC110794.1-201ENST00000505816 425 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RNA5SP341-201ENST00000516261 117 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AP004247.1-201ENST00000531556 1289 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 MIR5004-201ENST00000579078 107 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AP001004.1-201ENST00000582468 324 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL451007.1-201ENST00000595491 289 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC013444.2-201ENST00000603317 787 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL357094.1-201ENST00000603845 844 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC011451.2-201ENST00000604303 598 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AC112187.2-201ENST00000604345 283 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 AL590099.1-201ENST00000615276 138 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.97□□□□□ -1.93
CCDC71Q8IV32 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC71Q8IV32 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC71Q8IV32 AL136164.4-201ENST00000625013 2135 ntBASIC2.96□□□□□ -1.93
CCDC71Q8IV32 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RNU6-97P-201ENST00000363387 104 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 SNORD116-8-201ENST00000384365 95 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 Y_RNA.548-201ENST00000384656 105 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RPS3AP26-201ENST00000398259 784 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RPL5P18-201ENST00000406671 891 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 HMGB1P11-201ENST00000413899 637 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RPL32P35-201ENST00000415214 394 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 USP9YP26-201ENST00000421008 661 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 MTCO1P39-201ENST00000426148 480 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 SETP8-201ENST00000435341 628 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RPL30P9-201ENST00000465586 330 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AL024509.2-201ENST00000493462 493 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC034222.1-201ENST00000494052 532 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RPF2P2-201ENST00000504693 896 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC004062.1-201ENST00000509926 645 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC090136.1-201ENST00000520009 240 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC103783.1-201ENST00000520506 373 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC007834.2-201ENST00000536310 343 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 OSBPL9P5-201ENST00000542581 171 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC015917.1-201ENST00000579654 510 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC006023.2-201ENST00000609916 167 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 TUG1_1.1-201ENST00000610654 145 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AL356321.1-201ENST00000621360 228 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AL360181.4-201ENST00000621752 134 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC078883.4-201ENST00000623218 367 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.96□□□□□ -1.94
CCDC71Q8IV32 AC006386.2-201ENST00000624491 75 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms