Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 RPL23AP41-201ENST00000484754 458 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 snoZ278.1-201ENST00000517059 112 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AP004372.1-201ENST00000604842 844 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AC135178.6-201ENST00000605314 398 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 AL162373.1-201ENST00000620433 407 ntBASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.09□□□□□ -2.08
CCDC171Q6TFL3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AL354685.2-201ENST00000448218 1447 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 MTCO3P12-201ENST00000416718 547 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AL358453.1-201ENST00000422522 250 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 NDUFA5P10-201ENST00000432147 357 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AL136380.1-201ENST00000447970 162 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC097493.1-201ENST00000463958 372 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC011352.3-201ENST00000505162 593 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC021146.7-201ENST00000509604 775 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 HMGB1P47-201ENST00000511281 589 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC087272.1-201ENST00000523624 533 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AGGF1P5-201ENST00000567900 919 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AL009028.1-201ENST00000604895 802 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 U6.48-201ENST00000618523 106 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC012150.2-201ENST00000621300 544 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 AC091932.3-201ENST00000624223 323 ntBASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC171Q6TFL3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 SGO1P2-201ENST00000429458 1589 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 RPL7P30-201ENST00000420888 709 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AC104689.1-201ENST00000473356 768 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AC133963.2-201ENST00000513686 578 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 RN7SKP31-201ENST00000516354 278 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AC104581.2-201ENST00000572227 430 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 OR1M4P-201ENST00000589199 287 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 AL158801.5-201ENST00000623123 465 ntBASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC171Q6TFL3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 OR4G2P-202ENST00000641004 1759 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 MTCO1P9-201ENST00000505577 1534 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC009296.1-201ENST00000443146 155 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 TPTE2P6-202ENST00000445572 1007 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AL034418.1-201ENST00000448675 860 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 RPS29P20-201ENST00000489592 171 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 CKS1BP2-201ENST00000497342 240 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 HMGB3P17-201ENST00000504195 649 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC091917.2-201ENST00000505002 744 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC093281.2-201ENST00000510153 597 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 OR4V1P-201ENST00000525394 1140 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 MIR4255-201ENST00000579351 72 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC013444.2-201ENST00000603317 787 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC005332.10-201ENST00000612725 619 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AC108479.2-201ENST00000617314 601 ntBASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC171Q6TFL3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 RNU6-167P-201ENST00000384292 106 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AL023807.1-201ENST00000407932 359 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms