Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.95
ATL3Q6DD88 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC011460.1-201ENST00000636268 1834 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AL672167.1-206ENST00000356293 943 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 MIR483-201ENST00000385070 76 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 HMGB1P17-201ENST00000403495 628 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AL590084.1-201ENST00000407885 387 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 BX682237.1-201ENST00000415016 335 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 RPS3AP37-201ENST00000419176 745 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AL031313.1-201ENST00000448435 256 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 OFD1P3Y-201ENST00000453312 783 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AL359385.1-201ENST00000456509 365 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC134050.1-201ENST00000495088 933 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC025881.1-201ENST00000518851 512 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 CKS1BP7-201ENST00000522230 235 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC087373.1-201ENST00000524920 491 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC243773.3-201ENST00000613270 256 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
ATL3Q6DD88 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 AC009812.4-201ENST00000569134 1805 ntBASIC2.89□□□□□ -1.95
ATL3Q6DD88 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 FRG1BP-201ENST00000278882 761 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 SNORD62.1-201ENST00000362541 86 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 SNORA41-201ENST00000384675 132 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 MTCO2P17-201ENST00000424336 677 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 USP9YP11-201ENST00000427537 717 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 MTCO2P25-201ENST00000447065 681 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 AC114981.1-201ENST00000503897 678 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 SEM1P1-201ENST00000506694 209 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 AC022483.1-201ENST00000514020 567 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 AC103783.1-201ENST00000520506 373 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATL3Q6DD88 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATL3Q6DD88 NBEAP1-201ENST00000554452 979 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 TPMTP1-201ENST00000592307 737 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 MTND3P19-201ENST00000603825 345 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 AL160281.1-201ENST00000605307 311 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 U4.3-201ENST00000621047 82 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.88□□□□□ -1.95
ATL3Q6DD88 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATL3Q6DD88 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.88□□□□□ -1.95
ATL3Q6DD88 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATL3Q6DD88 MIR208A-201ENST00000362287 71 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 RNU6-859P-201ENST00000362728 107 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 SNORD116.1-201ENST00000365628 92 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 RNU6-413P-201ENST00000384115 107 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AL162578.1-201ENST00000406202 378 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 RNU2-43P-201ENST00000410306 190 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 NDUFB4P6-201ENST00000436819 366 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC107083.1-201ENST00000439643 279 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 RAC1P7-201ENST00000445367 377 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC007327.1-201ENST00000447461 264 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 MTCO3P11-201ENST00000455103 774 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC027673.1-201ENST00000456245 405 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC080014.1-201ENST00000496877 1201 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC034159.1-201ENST00000513885 583 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 MTND5P4-201ENST00000514978 288 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 SNORA70.24-201ENST00000517233 118 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 HMGB1P14-201ENST00000557424 591 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 MIR4509-3-201ENST00000578671 94 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.87□□□□□ -1.95
ATL3Q6DD88 MIR4509-2-201ENST00000583920 94 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 GLUD1P4-201ENST00000590914 418 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC020895.1-201ENST00000595362 272 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 AC021749.1-201ENST00000604322 607 ntBASIC2.87□□□□□ -1.95
ATL3Q6DD88 NUTF2P8-201ENST00000604593 363 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms