Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC020893.1-201ENST00000502452 580 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT40Q6A162 RNA5SP179-201ENST00000517284 121 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC087369.1-201ENST00000520775 996 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT40Q6A162 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC092470.1-201ENST00000546187 132 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 AC093027.1-201ENST00000546698 429 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT40Q6A162 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT40Q6A162 AC005858.4-201ENST00000623191 700 ntBASIC4.55□□□□□ -1.68
KRT40Q6A162 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.55□□□□□ -1.68
KRT40Q6A162 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT40Q6A162 SAGE4P-201ENST00000442271 3381 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.54□□□□□ -1.68
KRT40Q6A162 ASNSP1-201ENST00000518311 1939 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT40Q6A162 AC011978.2-201ENST00000569835 2054 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AL591416.1-201ENST00000404015 867 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AL356432.1-201ENST00000405809 419 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 RNU6-1148P-201ENST00000410992 104 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 MTCO3P12-201ENST00000416718 547 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT40Q6A162 FTH1P1-201ENST00000437933 532 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 BNIP3P2-201ENST00000441221 577 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 NOTCH2P1-201ENST00000443481 624 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 RANP8-201ENST00000444720 713 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC007677.1-201ENST00000445757 515 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 RPS17P13-201ENST00000448974 407 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 RPL7P52-201ENST00000449200 742 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC021382.1-201ENST00000483523 359 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC093278.1-201ENST00000494700 600 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC110792.2-201ENST00000510278 224 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT40Q6A162 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 HPRT1P3-201ENST00000539521 576 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT40Q6A162 OR4T1P-201ENST00000554933 911 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 HMGB1P6-201ENST00000569046 646 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC120057.2-201ENST00000571520 271 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 AC011471.1-201ENST00000585766 187 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC011712.1-201ENST00000588959 234 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT40Q6A162 AC113194.1-201ENST00000606037 500 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AL132765.2-201ENST00000610812 351 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 MIR4727-201ENST00000622232 55 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 AC009093.8-201ENST00000641769 292 ntBASIC4.54□□□□□ -1.68
KRT40Q6A162 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KRT40Q6A162 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT40Q6A162 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
KRT40Q6A162 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KRT40Q6A162 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 BDP1P-201ENST00000582658 1990 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC114546.3-201ENST00000623582 1734 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KRT40Q6A162 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KRT40Q6A162 FRG1CP-201ENST00000358464 769 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 RNU6-223P-201ENST00000362830 107 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 RNU6-1097P-201ENST00000363586 107 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 Y_RNA.157-201ENST00000363638 102 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 U3.20-201ENST00000390909 217 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 RPS20P15-201ENST00000412792 311 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.53□□□□□ -1.68
KRT40Q6A162 EZH2P1-201ENST00000431167 291 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AL138799.3-201ENST00000438968 350 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AC127537.2-201ENST00000439258 465 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AC108734.1-201ENST00000439549 399 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.53□□□□□ -1.68
KRT40Q6A162 NANOGP10-201ENST00000453325 895 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.53□□□□□ -1.68
KRT40Q6A162 RPL23AP41-201ENST00000484754 458 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.53□□□□□ -1.68
KRT40Q6A162 SCARNA15.1-201ENST00000516384 125 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 Y_RNA.675-201ENST00000516389 149 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 Y_RNA.701-201ENST00000516812 110 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.53□□□□□ -1.68
KRT40Q6A162 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC125611.2-201ENST00000551907 647 ntBASIC4.53□□□□□ -1.68
KRT40Q6A162 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.53□□□□□ -1.68
KRT40Q6A162 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms