Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 SALL4P2-201ENST00000423288 2910 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 Y_RNA.126-201ENST00000363382 111 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 RNU6-806P-201ENST00000365147 105 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 RNU6-128P-201ENST00000383976 107 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 Y_RNA.478-201ENST00000384358 107 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 RPL30P2-201ENST00000414021 291 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 AF186996.5-201ENST00000418098 904 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 RBMY1KP-201ENST00000423480 476 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 RPL21P8-201ENST00000465083 535 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC026784.1-201ENST00000507986 352 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC090115.3-201ENST00000553218 849 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 MIR3941-201ENST00000582572 103 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 SDR42E1P2-201ENST00000614861 481 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 SDR42E1P4-201ENST00000620894 481 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF43Q68DV7 AC134882.1-201ENST00000603738 1676 ntBASIC5.12□□□□□ -1.59
RNF43Q68DV7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF43Q68DV7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 ZNF72P-201ENST00000425869 1908 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 NXPH1-205ENST00000602349 1953 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 RNU6-1059P-201ENST00000363752 98 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 Y_RNA.270-201ENST00000364693 104 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 Y_RNA.276-201ENST00000364732 109 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 RNU6-225P-201ENST00000384613 103 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 RNU6-95P-201ENST00000384697 107 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AL445189.1-201ENST00000405722 338 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC096664.2-201ENST00000411843 406 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 HMGN1P24-201ENST00000412282 298 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC069213.2-201ENST00000420238 366 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 MRPS18BP2-201ENST00000434310 759 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 RPL36AP6-201ENST00000435770 321 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC105402.2-201ENST00000438503 358 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 PLGLA-201ENST00000465668 449 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 RN7SL319P-201ENST00000480656 221 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 RNU6-1069P-201ENST00000516612 133 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 RNU6-307P-201ENST00000516743 106 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 Y_RNA.700-201ENST00000516806 100 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 FAM60DP-201ENST00000524174 632 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC040926.1-201ENST00000530195 238 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC009643.1-201ENST00000532030 391 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 NDUFB4P11-201ENST00000560510 395 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC106782.4-201ENST00000568264 210 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 AC023813.4-201ENST00000607580 580 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms