Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EXOC5P1-201ENST00000510543 1969 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 Y_RNA.151-201ENST00000363566 112 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 OR1L6-202ENST00000373684 1044 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 RNA5SP107-201ENST00000411358 122 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 SYF2P2-201ENST00000417620 583 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC092162.1-201ENST00000432828 434 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 RPL36AP13-201ENST00000457490 317 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC090602.1-201ENST00000469695 252 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC144568.1-201ENST00000520139 137 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC034114.1-201ENST00000520293 285 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 MIR3160-1-201ENST00000577972 85 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 MIR4293-201ENST00000584305 78 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC093227.2-201ENST00000589357 285 ntBASIC6.19□□□□□ -1.42
RC3H1Q5TC82 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RC3H1Q5TC82 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 RNU6-715P-201ENST00000365204 103 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 MIR625-201ENST00000385047 85 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AL035079.1-201ENST00000405210 287 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 UBE2V1P4-201ENST00000425374 344 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 RPS26P56-201ENST00000444468 240 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 RPL29P29-201ENST00000448725 423 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AL162591.2-201ENST00000449634 317 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AC069499.1-201ENST00000489433 509 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AC005726.1-201ENST00000494679 427 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 DEFB108E-201ENST00000524692 240 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AL133271.1-201ENST00000538229 291 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 MIR5699-201ENST00000578903 90 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AL020997.2-201ENST00000602607 184 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AP001485.1-201ENST00000604799 199 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 MIR6716-201ENST00000613413 80 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AL022401.1-201ENST00000619498 108 ntBASIC6.18□□□□□ -1.42
RC3H1Q5TC82 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.18□□□□□ -1.42
RC3H1Q5TC82 AP000756.2-201ENST00000624168 2567 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC009951.1-201ENST00000623674 2614 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 XIAPP3-201ENST00000312918 795 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 RNU6-1290P-201ENST00000362957 109 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 RNU6-682P-201ENST00000363843 106 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 RNU6-596P-201ENST00000365395 98 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 MIR215-201ENST00000384858 110 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 MIR1193-201ENST00000408109 78 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC099670.2-201ENST00000435130 321 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AL691482.1-201ENST00000453255 87 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AL136126.1-201ENST00000473603 402 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC110792.1-201ENST00000491826 472 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC008716.1-201ENST00000511084 513 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC133555.2-201ENST00000550213 292 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 RPL23AP84-201ENST00000571193 464 ntBASIC6.17□□□□□ -1.42
RC3H1Q5TC82 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.17□□□□□ -1.42
RC3H1Q5TC82 AL121932.1-201ENST00000605542 214 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms