Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RNU6-195P-201ENST00000411352 109 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 HMGN1P14-201ENST00000412459 517 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 RPS7P13-201ENST00000413955 498 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AL158156.1-201ENST00000422509 473 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 MTND1P29-201ENST00000448112 647 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 RPL23AP31-201ENST00000456160 467 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 RNA5SP269-201ENST00000459032 137 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC055855.1-201ENST00000489563 579 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC114797.1-201ENST00000514003 728 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 SNORD59.2-201ENST00000516873 68 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 RN7SKP209-201ENST00000516888 304 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 RNU6-1003P-201ENST00000517099 105 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC087369.1-201ENST00000520775 996 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 SUMO2P20-201ENST00000520803 283 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 SETP2-201ENST00000553886 926 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC099489.2-201ENST00000574976 260 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC015871.2-201ENST00000603605 948 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC008962.1-201ENST00000605729 304 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 BRDTP1-201ENST00000605735 677 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC006566.1-201ENST00000608943 513 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC108747.1-201ENST00000609508 535 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC002076.2-201ENST00000617362 122 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC006111.3-201ENST00000622137 383 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AL353748.2-201ENST00000622148 471 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC091905.1-201ENST00000624400 311 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC010733.2-201ENST00000589496 5702 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AC009902.3-201ENST00000606235 2172 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 TEX21P-201ENST00000447107 1476 ntBASIC3.15□□□□□ -1.91
PDLIM3Q53GG5 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC092104.1-201ENST00000497346 1441 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 RNY4P16-201ENST00000364768 94 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 RNU6-637P-201ENST00000384050 107 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 RNU6-432P-201ENST00000384196 109 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 RPL7P25-201ENST00000404151 721 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 Y_RNA.608-201ENST00000410647 95 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 UBE2FP1-201ENST00000416536 447 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC006366.1-201ENST00000422002 759 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AL159987.2-201ENST00000432754 307 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC024082.2-201ENST00000434771 238 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AL353706.1-201ENST00000436728 494 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 MTND1P27-201ENST00000451117 902 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 MTND1P3-201ENST00000484956 952 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC093278.1-201ENST00000494700 600 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC010265.1-201ENST00000513509 211 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 ERHP1-201ENST00000523006 310 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC022690.1-201ENST00000526681 550 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC022878.1-201ENST00000530684 149 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 OR5B10P-201ENST00000532869 642 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 YPEL5P3-201ENST00000547227 352 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AL356432.3-201ENST00000568952 465 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 MTND1P15-201ENST00000579262 949 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 COX6CP3-201ENST00000580869 223 ntBASIC3.14□□□□□ -1.91
PDLIM3Q53GG5 AC103987.3-201ENST00000582071 292 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms