Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU6-878P-201ENST00000384578 110 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 MIR512-1-201ENST00000384913 84 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 AL136372.1-201ENST00000403060 228 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 USP9YP11-201ENST00000427537 717 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 COX7BP2-201ENST00000437976 242 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 OR6K5P-201ENST00000447050 945 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 MTCO2P25-201ENST00000447065 681 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 ARL4AP2-201ENST00000507378 601 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 AC021146.8-201ENST00000507455 733 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 MTND2P32-201ENST00000521584 1038 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 AC055876.1-202ENST00000567053 138 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 MIR3124-201ENST00000582636 67 ntBASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHROOM1Q2M3G4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AL672167.1-206ENST00000356293 943 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 MIR513B-201ENST00000385136 84 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 TIMM9P2-201ENST00000419324 266 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AL137014.1-201ENST00000420490 1226 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 MTCO1P39-201ENST00000426148 480 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC234781.2-201ENST00000426370 994 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AL590233.1-201ENST00000430017 456 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 MTCYBP45-201ENST00000435243 565 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 MTCO2P20-201ENST00000437339 673 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 RPS29P6-201ENST00000438196 145 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 MTND2P20-201ENST00000440805 661 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC079395.1-201ENST00000510981 262 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC110760.3-202ENST00000515177 371 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AL158042.1-201ENST00000605338 460 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC092106.3-201ENST00000611308 722 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC109809.1-201ENST00000619665 545 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 AC004009.2-201ENST00000623016 728 ntBASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHROOM1Q2M3G4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 Y_RNA.311-201ENST00000365068 96 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RPL23AP29-201ENST00000397284 453 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RNA5SP492-201ENST00000411330 114 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AL139413.1-201ENST00000421309 217 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC019178.2-201ENST00000423595 505 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC007742.1-201ENST00000425789 329 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RPS25P9-201ENST00000435591 252 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 ELOCP26-201ENST00000436067 329 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 Z80107.1-201ENST00000436830 412 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RPL23AP74-201ENST00000437246 471 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC020699.1-201ENST00000505161 445 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC010625.1-201ENST00000511296 403 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC109445.1-201ENST00000512356 383 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RNU6-311P-201ENST00000516224 102 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RNU6-150P-201ENST00000516237 95 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 RNA5SP148-201ENST00000516527 94 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC022861.1-201ENST00000522981 663 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC091544.4-201ENST00000555268 342 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 HMGB1P14-201ENST00000557424 591 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 MED28P6-201ENST00000558776 231 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 OR4K7P-201ENST00000580232 945 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 MIR3945-201ENST00000581853 98 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 ZNF861P-201ENST00000588126 639 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC105148.1-201ENST00000604961 409 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC006270.3-201ENST00000605967 1036 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC116312.1-201ENST00000606841 314 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC005046.1-201ENST00000608515 625 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC004696.1-201ENST00000614345 607 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC025588.4-201ENST00000615802 908 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms