Protein–RNA interactions for Protein: Q17RM4

CCDC142, Coiled-coil domain-containing protein 142, humanhuman

Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142Q17RM4 MIR16-1-201ENST00000385271 89 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AL450338.1-201ENST00000407987 512 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RN7SKP177-201ENST00000410567 355 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC092745.2-202ENST00000411880 369 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AL589872.1-201ENST00000426602 288 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RPL36AP53-201ENST00000432891 316 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RPL7P29-201ENST00000437151 728 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 HMGB1P18-201ENST00000438801 619 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 SEPT14P3-201ENST00000439401 183 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RANP8-201ENST00000444720 713 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AL732372.2-207ENST00000445840 183 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 SEPT14P2-201ENST00000453405 183 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RPL18AP17-201ENST00000455326 198 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 SNORA84-201ENST00000459229 133 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RPL23AP71-201ENST00000470966 469 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 SEPT14P4-201ENST00000513445 186 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 BTF3P12-201ENST00000519620 469 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC007991.1-201ENST00000522680 631 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 FO082796.1-201ENST00000523795 183 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 TRAV15-201ENST00000556680 249 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC004817.2-201ENST00000561794 651 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC010653.1-201ENST00000571108 881 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 MIR4307-201ENST00000582802 84 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AL080274.1-201ENST00000605565 220 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AL355472.4-201ENST00000610233 626 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 RMST_9.1-201ENST00000619945 193 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AL354798.1-201ENST00000622505 329 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AC090617.10-201ENST00000624308 134 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 MKKS-204ENST00000639674 192 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 AP001486.2-201ENST00000561652 5113 ntBASIC4.18□□□□□ -1.74
CCDC142Q17RM4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC142Q17RM4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 RNU6-462P-201ENST00000362659 105 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 Y_RNA.387-201ENST00000383918 102 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 SPA17P1-201ENST00000416656 452 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC010307.1-201ENST00000467206 836 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 RN7SL323P-201ENST00000494712 295 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC093853.1-201ENST00000515689 483 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 Y_RNA.691-201ENST00000516611 103 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 PSMA2P1-201ENST00000526365 646 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC091516.1-201ENST00000549191 703 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 CYCSP2-201ENST00000558168 301 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC090751.1-201ENST00000566966 267 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC006270.2-201ENST00000578523 652 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 MIR5685-201ENST00000579080 79 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC021646.1-201ENST00000605469 484 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AL627309.6-201ENST00000606857 840 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC097468.3-201ENST00000607956 456 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC104237.2-201ENST00000612456 443 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC039056.2-201ENST00000622261 511 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 AC091925.1-201ENST00000623204 462 ntBASIC4.17□□□□□ -1.74
CCDC142Q17RM4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC142Q17RM4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms