Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RNU6-769P-201ENST00000384407 104 ntBASIC2.75□□□□□ -1.97
CD47Q08722 SNORD67-201ENST00000390833 111 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL049545.1-201ENST00000401856 572 ntBASIC2.75□□□□□ -1.97
CD47Q08722 RPL7P25-201ENST00000404151 721 ntBASIC2.75□□□□□ -1.97
CD47Q08722 RN7SKP266-201ENST00000410232 287 ntBASIC2.75□□□□□ -1.97
CD47Q08722 RNU2-71P-201ENST00000411395 189 ntBASIC2.75□□□□□ -1.97
CD47Q08722 HMGB1P11-201ENST00000413899 637 ntBASIC2.75□□□□□ -1.97
CD47Q08722 MTCO1P39-201ENST00000426148 480 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.75□□□□□ -1.97
CD47Q08722 RPL21P40-201ENST00000428586 483 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.75□□□□□ -1.97
CD47Q08722 AC005326.1-201ENST00000429197 123 ntBASIC2.75□□□□□ -1.97
CD47Q08722 SAR1AP4-201ENST00000429225 591 ntBASIC2.75□□□□□ -1.97
CD47Q08722 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.75□□□□□ -1.97
CD47Q08722 OR4K11P-201ENST00000431829 904 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.75□□□□□ -1.97
CD47Q08722 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.75□□□□□ -1.97
CD47Q08722 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.75□□□□□ -1.97
CD47Q08722 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.75□□□□□ -1.97
CD47Q08722 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
CD47Q08722 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD47Q08722 Z75741.1-201ENST00000446793 314 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.75□□□□□ -1.97
CD47Q08722 EPS15P1-201ENST00000448836 336 ntBASIC2.75□□□□□ -1.97
CD47Q08722 PAXBP1P1-201ENST00000449315 447 ntBASIC2.75□□□□□ -1.97
CD47Q08722 SSXP4-201ENST00000451349 245 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.75□□□□□ -1.97
CD47Q08722 ZNF114P1-201ENST00000453500 292 ntBASIC2.75□□□□□ -1.97
CD47Q08722 snoU13.8-201ENST00000458890 104 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC091153.1-201ENST00000466297 402 ntBASIC2.75□□□□□ -1.97
CD47Q08722 RPL23AP11-201ENST00000475260 469 ntBASIC2.75□□□□□ -1.97
CD47Q08722 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD47Q08722 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.75□□□□□ -1.97
CD47Q08722 AC111000.2-201ENST00000507775 550 ntBASIC2.75□□□□□ -1.97
CD47Q08722 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.75□□□□□ -1.97
CD47Q08722 MTND5P4-201ENST00000514978 288 ntBASIC2.75□□□□□ -1.97
CD47Q08722 RNU6-528P-201ENST00000516926 100 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.75□□□□□ -1.97
CD47Q08722 AP004247.1-201ENST00000531556 1289 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC007834.2-201ENST00000536310 343 ntBASIC2.75□□□□□ -1.97
CD47Q08722 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.75□□□□□ -1.97
CD47Q08722 OSBPL9P5-201ENST00000542581 171 ntBASIC2.75□□□□□ -1.97
CD47Q08722 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.75□□□□□ -1.97
CD47Q08722 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.75□□□□□ -1.97
CD47Q08722 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC006504.3-201ENST00000586818 523 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL031985.2-201ENST00000600955 480 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL022099.1-201ENST00000604551 712 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AL031176.1-201ENST00000604554 466 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC106028.5-201ENST00000610332 395 ntBASIC2.75□□□□□ -1.97
CD47Q08722 Z99129.2-201ENST00000619967 314 ntBASIC2.75□□□□□ -1.97
CD47Q08722 AC002550.2-201ENST00000621246 394 ntBASIC2.75□□□□□ -1.97
CD47Q08722 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD47Q08722 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CD47Q08722 AC009487.2-201ENST00000420969 6821 ntBASIC2.75□□□□□ -1.97
CD47Q08722 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CD47Q08722 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CD47Q08722 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CD47Q08722 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD47Q08722 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD47Q08722 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CD47Q08722 SNORA71.3-201ENST00000362582 128 ntBASIC2.74□□□□□ -1.97
CD47Q08722 RNU6-1181P-201ENST00000384191 106 ntBASIC2.74□□□□□ -1.97
CD47Q08722 RNU6-114P-201ENST00000384704 105 ntBASIC2.74□□□□□ -1.97
CD47Q08722 MIR181A2-201ENST00000384863 110 ntBASIC2.74□□□□□ -1.97
CD47Q08722 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CD47Q08722 SNORA48.7-201ENST00000391302 135 ntBASIC2.74□□□□□ -1.97
CD47Q08722 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CD47Q08722 MIR887-201ENST00000401258 79 ntBASIC2.74□□□□□ -1.97
CD47Q08722 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.74□□□□□ -1.97
CD47Q08722 RNU4-47P-201ENST00000410876 114 ntBASIC2.74□□□□□ -1.97
CD47Q08722 RNU6-920P-201ENST00000410926 92 ntBASIC2.74□□□□□ -1.97
CD47Q08722 MTCO1P17-201ENST00000411522 491 ntBASIC2.74□□□□□ -1.97
CD47Q08722 MTCO3P12-201ENST00000416718 547 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AL365203.2-201ENST00000423444 196 ntBASIC2.74□□□□□ -1.97
CD47Q08722 MTND4P20-201ENST00000424125 869 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.74□□□□□ -1.97
CD47Q08722 DUTP6-201ENST00000425573 462 ntBASIC2.74□□□□□ -1.97
CD47Q08722 RABEPKP1-201ENST00000440529 1026 ntBASIC2.74□□□□□ -1.97
CD47Q08722 COX6CP2-201ENST00000444980 225 ntBASIC2.74□□□□□ -1.97
CD47Q08722 RAC1P7-201ENST00000445367 377 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AC016696.1-201ENST00000446949 318 ntBASIC2.74□□□□□ -1.97
CD47Q08722 OR6K1P-201ENST00000456766 971 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.74□□□□□ -1.97
CD47Q08722 SNORD121B-201ENST00000458838 81 ntBASIC2.74□□□□□ -1.97
CD47Q08722 snoU13.4-201ENST00000458916 104 ntBASIC2.74□□□□□ -1.97
CD47Q08722 SETP11-201ENST00000473027 690 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AC104563.1-201ENST00000476147 376 ntBASIC2.74□□□□□ -1.97
CD47Q08722 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AP001025.2-201ENST00000490908 477 ntBASIC2.74□□□□□ -1.97
CD47Q08722 RPL21P129-201ENST00000491732 478 ntBASIC2.74□□□□□ -1.97
CD47Q08722 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.74□□□□□ -1.97
CD47Q08722 HSPD1P15-201ENST00000505573 1122 ntBASIC2.74□□□□□ -1.97
CD47Q08722 KLHL2P1-201ENST00000508691 521 ntBASIC2.74□□□□□ -1.97
CD47Q08722 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.74□□□□□ -1.97
CD47Q08722 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.74□□□□□ -1.97
CD47Q08722 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.74□□□□□ -1.97
CD47Q08722 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.74□□□□□ -1.97
CD47Q08722 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.74□□□□□ -1.97
CD47Q08722 RNA5SP216-201ENST00000516111 123 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms