Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RN7SKP60-201ENST00000516985 239 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 IGLVIV-65-201ENST00000517313 360 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX6-1P78426 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 AP005205.1-201ENST00000563503 508 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC067852.3-201ENST00000589177 561 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 SLC25A36P1-201ENST00000590111 465 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC002545.1-201ENST00000592511 181 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 BNIP3P10-201ENST00000605360 577 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL158032.1-201ENST00000605401 106 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC006023.2-201ENST00000609916 167 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC114781.5-201ENST00000615297 108 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AL359547.2-201ENST00000615810 418 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC233309.1-201ENST00000619522 751 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AC140113.4-201ENST00000622087 222 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 AP003122.6-201ENST00000623831 495 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX6-1P78426 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 AC018529.3-201ENST00000624212 2254 ntBASIC3.98□□□□□ -1.77
NKX6-1P78426 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NKX6-1P78426 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NKX6-1P78426 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX6-1P78426 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NKX6-1P78426 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX6-1P78426 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 OR4G2P-202ENST00000641004 1759 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX6-1P78426 RNU6-50P-201ENST00000362356 103 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RNU6-552P-201ENST00000362869 119 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 Y_RNA.157-201ENST00000363638 102 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 Y_RNA.160-201ENST00000363677 92 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 Y_RNA.303-201ENST00000364998 94 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RNU6-190P-201ENST00000384154 102 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RNU6-903P-201ENST00000391270 109 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX6-1P78426 SDHCP2-201ENST00000398565 501 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AL356776.1-201ENST00000406574 447 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AL356387.2-201ENST00000422272 243 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RPS12P10-201ENST00000427031 377 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC011998.1-201ENST00000433403 117 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 MTND5P20-201ENST00000448677 143 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AL162395.1-201ENST00000457882 422 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RPL21P104-201ENST00000464143 478 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 TRBV1-201ENST00000476502 284 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC092436.1-201ENST00000506450 503 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RNA5SP154-201ENST00000516193 111 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 SNORA20.3-201ENST00000516880 132 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 NRON-201ENST00000517270 370 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 OR5D17P-201ENST00000531492 978 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX6-1P78426 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC005730.3-201ENST00000583067 366 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC010525.2-201ENST00000590920 195 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 DPPA3P3-201ENST00000603842 430 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 AC012409.3-201ENST00000611343 981 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 RMST_3.1-201ENST00000611651 109 ntBASIC3.97□□□□□ -1.77
NKX6-1P78426 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX6-1P78426 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX6-1P78426 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NKX6-1P78426 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX6-1P78426 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX6-1P78426 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX6-1P78426 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX6-1P78426 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX6-1P78426 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NKX6-1P78426 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NKX6-1P78426 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.96□□□□□ -1.77
NKX6-1P78426 ASNSP3-201ENST00000451989 1306 ntBASIC3.96□□□□□ -1.77
NKX6-1P78426 AL672167.1-203ENST00000641299 2975 ntBASIC3.96□□□□□ -1.77
NKX6-1P78426 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
NKX6-1P78426 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
NKX6-1P78426 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NKX6-1P78426 OR4G1P-203ENST00000641984 1631 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AL139276.1-201ENST00000311910 1001 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NKX6-1P78426 AL133412.1-201ENST00000380194 2992 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 RNU4-46P-201ENST00000410818 138 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 RNU6-193P-201ENST00000410977 107 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AC011933.1-201ENST00000413334 321 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 RPL30P2-201ENST00000414021 291 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AL513185.2-201ENST00000425543 193 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 AL590383.1-201ENST00000428602 75 ntBASIC3.96□□□□□ -1.78
NKX6-1P78426 NEK4P1-201ENST00000433383 879 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms