Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC092638.1-201ENST00000411966 1275 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AC009237.2-201ENST00000421358 284 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA4P78363 C1DP3-201ENST00000455013 423 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AC025033.1-201ENST00000463883 194 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 RNU4-18P-201ENST00000516751 149 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.53□□□□□ -2.16
ABCA4P78363 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA4P78363 HSPE1P20-201ENST00000538133 289 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA4P78363 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA4P78363 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA4P78363 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA4P78363 AC005021.1-201ENST00000608730 355 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AC092954.1-201ENST00000609121 445 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AC012150.2-201ENST00000621300 544 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 AP000553.5-201ENST00000641933 54 ntBASIC1.53□□□□□ -2.16
ABCA4P78363 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ABCA4P78363 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 Y_RNA.224-201ENST00000364308 111 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 RNY1P14-201ENST00000384426 108 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 TAS2R15P-201ENST00000390674 928 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 AL512504.1-201ENST00000415494 778 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 AL606495.1-201ENST00000422100 813 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA4P78363 LSM1P1-201ENST00000438629 273 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA4P78363 RNA5SP220-201ENST00000516298 104 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 HMGB1P46-201ENST00000520062 610 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA4P78363 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.52□□□□□ -2.17
ABCA4P78363 AL009028.1-201ENST00000604895 802 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 RNU6-193P-201ENST00000410977 107 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 Z75741.2-201ENST00000417272 1167 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 MTCO3P4-201ENST00000419236 787 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 AL358453.1-201ENST00000422522 250 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 RPL23AP7-203ENST00000449021 469 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 SSXP1-201ENST00000453640 473 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 snoU13.3-201ENST00000459441 104 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ABCA4P78363 POLR2KP1-201ENST00000553226 168 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.52□□□□□ -2.17
ABCA4P78363 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
ABCA4P78363 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ABCA4P78363 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA4P78363 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
ABCA4P78363 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ABCA4P78363 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA4P78363 SNORA7.1-201ENST00000363750 139 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AL627390.1-201ENST00000396055 340 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AL035405.1-201ENST00000400795 710 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNA5SP338-201ENST00000410495 85 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA4P78363 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.51□□□□□ -2.17
ABCA4P78363 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.51□□□□□ -2.17
ABCA4P78363 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.51□□□□□ -2.17
ABCA4P78363 MTND3P24-201ENST00000506306 329 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC010625.1-201ENST00000511296 403 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RN7SKP40-201ENST00000517211 242 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 IGLV3-17-201ENST00000519099 244 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.51□□□□□ -2.17
ABCA4P78363 AC008562.1-201ENST00000521763 330 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 SNORD53B-201ENST00000577887 78 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC245036.5-201ENST00000596330 847 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 MIR8081-201ENST00000611533 95 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AL355810.1-201ENST00000614629 552 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 LINC00216-201ENST00000623548 1126 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA4P78363 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
ABCA4P78363 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA4P78363 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-1-201ENST00000383898 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-42P-201ENST00000384165 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-36P-201ENST00000384172 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-4P-201ENST00000384205 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-5P-201ENST00000384238 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-3P-201ENST00000384314 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-2-201ENST00000384627 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-9-201ENST00000384776 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 RNU6-33P-201ENST00000384793 107 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 MTATP6P31-201ENST00000406985 692 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 EIF1AXP1-201ENST00000419267 435 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.51□□□□□ -2.17
ABCA4P78363 AL031183.1-201ENST00000457667 207 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 AC073901.1-201ENST00000462471 408 ntBASIC1.51□□□□□ -2.17
ABCA4P78363 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ABCA4P78363 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.51□□□□□ -2.17
ABCA4P78363 AL049870.4-201ENST00000555741 486 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms