Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL049634.3-201ENST00000604968 457 ntBASIC3.88□□□□□ -1.79
SUMO3P55854 AC106900.2-201ENST00000604994 317 ntBASIC3.88□□□□□ -1.79
SUMO3P55854 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SUMO3P55854 DISC2.1-201ENST00000612827 205 ntBASIC3.88□□□□□ -1.79
SUMO3P55854 AC034102.8-201ENST00000615146 484 ntBASIC3.88□□□□□ -1.79
SUMO3P55854 AC024940.5-201ENST00000622889 474 ntBASIC3.88□□□□□ -1.79
SUMO3P55854 AL445363.3-201ENST00000623080 671 ntBASIC3.88□□□□□ -1.79
SUMO3P55854 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SUMO3P55854 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SUMO3P55854 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SUMO3P55854 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SUMO3P55854 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.87□□□□□ -1.79
SUMO3P55854 AC103710.2-202ENST00000641454 2853 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SUMO3P55854 AC007685.1-201ENST00000329806 452 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 RNU6-451P-201ENST00000362921 107 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SUMO3P55854 DEFB109C-201ENST00000382575 264 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 DEFB109B-201ENST00000382656 264 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 Y_RNA.576-201ENST00000384781 102 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SUMO3P55854 FGF7P8-201ENST00000402994 292 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AL354719.1-201ENST00000406535 843 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.87□□□□□ -1.79
SUMO3P55854 EIF4EP1-201ENST00000422311 642 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 MTCYBP8-201ENST00000422855 651 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 HMGB1P12-201ENST00000438594 598 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.87□□□□□ -1.79
SUMO3P55854 RPL31P60-201ENST00000478450 367 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 VWA8P1-201ENST00000510889 176 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC008958.1-201ENST00000511047 682 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 SNORD60.2-201ENST00000516883 86 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.87□□□□□ -1.79
SUMO3P55854 AP005435.4-201ENST00000529514 284 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 ADI1P3-201ENST00000549509 470 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.87□□□□□ -1.79
SUMO3P55854 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SUMO3P55854 MIR4703-201ENST00000577728 79 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.87□□□□□ -1.79
SUMO3P55854 AC008521.1-201ENST00000587471 187 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC002545.1-201ENST00000592511 181 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC020910.2-201ENST00000603635 610 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AL020991.1-201ENST00000612314 373 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC090132.2-201ENST00000615881 347 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.87□□□□□ -1.79
SUMO3P55854 MTND5P42-201ENST00000637720 498 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 AC008013.2-202ENST00000637965 364 ntBASIC3.87□□□□□ -1.79
SUMO3P55854 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SUMO3P55854 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.87□□□□□ -1.79
SUMO3P55854 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.87□□□□□ -1.79
SUMO3P55854 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SUMO3P55854 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.87□□□□□ -1.79
SUMO3P55854 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SUMO3P55854 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SUMO3P55854 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.86□□□□□ -1.79
SUMO3P55854 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SUMO3P55854 AL133383.2-201ENST00000622958 2336 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 RPL7P26-201ENST00000333817 754 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 RNA5SP52-201ENST00000362448 134 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 Y_RNA.88-201ENST00000363029 99 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 U3.22-201ENST00000391120 215 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RNU6-903P-201ENST00000391270 109 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AL136116.1-201ENST00000403591 381 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 SNORA11B-201ENST00000408175 129 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 AC068533.1-201ENST00000418542 415 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.86□□□□□ -1.79
SUMO3P55854 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 BTF3P10-201ENST00000433415 495 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 FABP5P13-201ENST00000452144 328 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RPS20P22-201ENST00000473700 357 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RN7SL481P-201ENST00000477764 299 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RPS29P19-201ENST00000479709 171 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AC069439.1-201ENST00000494739 167 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.86□□□□□ -1.79
SUMO3P55854 AC092436.1-201ENST00000506450 503 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.86□□□□□ -1.79
SUMO3P55854 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SUMO3P55854 AC098591.2-201ENST00000510152 315 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 FTH1P9-201ENST00000513251 355 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms