Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC078814.3-201ENST00000553036 491 ntBASIC3□□□□□ -1.93
MSH6P52701 AC023825.1-201ENST00000566704 1030 ntBASIC3□□□□□ -1.93
MSH6P52701 AC018926.1-201ENST00000616335 435 ntBASIC3□□□□□ -1.93
MSH6P52701 AC091046.2-201ENST00000620775 665 ntBASIC3□□□□□ -1.93
MSH6P52701 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
MSH6P52701 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
MSH6P52701 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
MSH6P52701 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
MSH6P52701 RNY1P10-201ENST00000363268 113 ntBASIC2.99□□□□□ -1.93
MSH6P52701 RNU5B-4P-201ENST00000363508 111 ntBASIC2.99□□□□□ -1.93
MSH6P52701 RNU6-115P-201ENST00000364310 107 ntBASIC2.99□□□□□ -1.93
MSH6P52701 RNU6-335P-201ENST00000364563 113 ntBASIC2.99□□□□□ -1.93
MSH6P52701 U8.8-201ENST00000365399 135 ntBASIC2.99□□□□□ -1.93
MSH6P52701 MIR489-201ENST00000384923 84 ntBASIC2.99□□□□□ -1.93
MSH6P52701 AL138880.1-201ENST00000405824 642 ntBASIC2.99□□□□□ -1.93
MSH6P52701 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.99□□□□□ -1.93
MSH6P52701 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH6P52701 MTCYBP15-201ENST00000433123 1127 ntBASIC2.99□□□□□ -1.93
MSH6P52701 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.99□□□□□ -1.93
MSH6P52701 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
MSH6P52701 MTCYBP37-201ENST00000510642 1133 ntBASIC2.99□□□□□ -1.93
MSH6P52701 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.99□□□□□ -1.93
MSH6P52701 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH6P52701 MTND1P36-201ENST00000522384 936 ntBASIC2.99□□□□□ -1.93
MSH6P52701 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH6P52701 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH6P52701 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH6P52701 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MSH6P52701 AC130650.2-201ENST00000618736 2403 ntBASIC2.98□□□□□ -1.93
MSH6P52701 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MSH6P52701 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
MSH6P52701 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
MSH6P52701 RNU6-582P-201ENST00000362989 107 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH6P52701 RNU6-730P-201ENST00000383954 104 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AL121972.1-201ENST00000402023 252 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AL139098.1-201ENST00000407291 389 ntBASIC2.98□□□□□ -1.93
MSH6P52701 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.98□□□□□ -1.93
MSH6P52701 FCF1P2-201ENST00000415284 583 ntBASIC2.98□□□□□ -1.93
MSH6P52701 TOMM22P1-201ENST00000418578 312 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AC006548.1-201ENST00000427470 102 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AC092634.2-201ENST00000428146 1010 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AC005345.1-201ENST00000431868 217 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH6P52701 AL591719.1-201ENST00000444669 744 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AC011753.1-201ENST00000451001 220 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH6P52701 RPL21P104-201ENST00000464143 478 ntBASIC2.98□□□□□ -1.93
MSH6P52701 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH6P52701 AC026414.1-201ENST00000504046 698 ntBASIC2.98□□□□□ -1.93
MSH6P52701 HMGB1P22-201ENST00000505315 124 ntBASIC2.98□□□□□ -1.93
MSH6P52701 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH6P52701 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH6P52701 AC112198.4-201ENST00000515450 351 ntBASIC2.98□□□□□ -1.93
MSH6P52701 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH6P52701 MTCYBP41-201ENST00000528913 1123 ntBASIC2.98□□□□□ -1.93
MSH6P52701 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH6P52701 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.98□□□□□ -1.93
MSH6P52701 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.98□□□□□ -1.93
MSH6P52701 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH6P52701 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH6P52701 CR381572.1-201ENST00000625098 102 ntBASIC2.98□□□□□ -1.93
MSH6P52701 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH6P52701 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MSH6P52701 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.97□□□□□ -1.93
MSH6P52701 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
MSH6P52701 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MSH6P52701 MIR6073-201ENST00000352083 89 ntBASIC2.97□□□□□ -1.93
MSH6P52701 RNU6-339P-201ENST00000384310 107 ntBASIC2.97□□□□□ -1.93
MSH6P52701 MCTS2P-201ENST00000394552 546 ntBASIC2.97□□□□□ -1.93
MSH6P52701 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MSH6P52701 TMSB4XP8-201ENST00000402089 135 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH6P52701 TMSB4XP6-201ENST00000415187 135 ntBASIC2.97□□□□□ -1.93
MSH6P52701 TMSB4XP1-201ENST00000424567 135 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH6P52701 HSPE1P28-201ENST00000443139 211 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AC093392.2-201ENST00000450682 337 ntBASIC2.97□□□□□ -1.93
MSH6P52701 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.97□□□□□ -1.93
MSH6P52701 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH6P52701 AC084024.2-201ENST00000503480 791 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AC016550.1-201ENST00000505348 785 ntBASIC2.97□□□□□ -1.93
MSH6P52701 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.97□□□□□ -1.93
MSH6P52701 LSM6P2-201ENST00000552208 177 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH6P52701 AL669831.4-202ENST00000590817 238 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL356575.1-201ENST00000603008 283 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL355812.1-201ENST00000603215 216 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.6-201ENST00000603753 252 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.11-201ENST00000604059 253 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.10-201ENST00000604330 253 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AC008162.1-201ENST00000604718 254 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.1-201ENST00000604752 252 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.2-201ENST00000604983 252 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.5-201ENST00000605253 252 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.4-201ENST00000605279 254 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.12-201ENST00000605291 253 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.8-201ENST00000605353 252 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.9-201ENST00000605428 253 ntBASIC2.97□□□□□ -1.93
MSH6P52701 AL670379.7-201ENST00000605823 252 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms