Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 USP9YP33-201ENST00000412220 421 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 RPL7P2-201ENST00000427639 268 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AL590233.1-201ENST00000430017 456 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK1P49759 USP9YP35-201ENST00000435696 412 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 AC092641.1-201ENST00000440229 772 ntBASIC3.39□□□□□ -1.87
CLK1P49759 UBBP3-201ENST00000445497 241 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK1P49759 ST13P20-201ENST00000447996 1065 ntBASIC3.39□□□□□ -1.87
CLK1P49759 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 TRGVB-201ENST00000453257 471 ntBASIC3.39□□□□□ -1.87
CLK1P49759 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.39□□□□□ -1.87
CLK1P49759 SNRPGP9-201ENST00000456025 225 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 AC116337.2-201ENST00000477662 156 ntBASIC3.39□□□□□ -1.87
CLK1P49759 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK1P49759 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 AC107401.1-201ENST00000503426 685 ntBASIC3.39□□□□□ -1.87
CLK1P49759 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 RAC1P2-201ENST00000511164 579 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK1P49759 NPM1P41-201ENST00000512920 831 ntBASIC3.39□□□□□ -1.87
CLK1P49759 RNU6-798P-201ENST00000516912 103 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC026241.1-201ENST00000517873 2142 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC022695.1-201ENST00000522089 237 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.39□□□□□ -1.87
CLK1P49759 AC087276.1-201ENST00000529659 480 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLK1P49759 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLK1P49759 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.39□□□□□ -1.87
CLK1P49759 AL157394.1-201ENST00000562983 1224 ntBASIC3.39□□□□□ -1.87
CLK1P49759 HMGB1P6-201ENST00000569046 646 ntBASIC3.39□□□□□ -1.87
CLK1P49759 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.39□□□□□ -1.87
CLK1P49759 RN7SL703P-201ENST00000578485 302 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 AC087683.1-201ENST00000591187 441 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC008739.2-201ENST00000597006 317 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AP003465.2-201ENST00000602571 373 ntBASIC3.39□□□□□ -1.87
CLK1P49759 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC073648.5-201ENST00000603502 305 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC015540.1-201ENST00000615828 501 ntBASIC3.39□□□□□ -1.87
CLK1P49759 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC073308.1-201ENST00000623696 305 ntBASIC3.39□□□□□ -1.87
CLK1P49759 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLK1P49759 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLK1P49759 RNA5SP515-201ENST00000364570 118 ntBASIC3.38□□□□□ -1.87
CLK1P49759 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.38□□□□□ -1.87
CLK1P49759 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
CLK1P49759 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
CLK1P49759 UBE2V1P10-201ENST00000414685 269 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.38□□□□□ -1.87
CLK1P49759 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 AC109583.1-201ENST00000432156 268 ntBASIC3.38□□□□□ -1.87
CLK1P49759 LSM1P1-201ENST00000438629 273 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AL512286.1-201ENST00000439244 400 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.38□□□□□ -1.87
CLK1P49759 RPL26P28-201ENST00000451325 435 ntBASIC3.38□□□□□ -1.87
CLK1P49759 MTCYBP1-201ENST00000454315 1119 ntBASIC3.38□□□□□ -1.87
CLK1P49759 USP9YP10-201ENST00000454868 628 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AL133162.1-201ENST00000463228 453 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AC090453.1-201ENST00000495560 436 ntBASIC3.38□□□□□ -1.87
CLK1P49759 MTCYBP17-201ENST00000503579 789 ntBASIC3.38□□□□□ -1.87
CLK1P49759 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.38□□□□□ -1.87
CLK1P49759 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.38□□□□□ -1.87
CLK1P49759 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.38□□□□□ -1.87
CLK1P49759 SCARNA14-201ENST00000516903 136 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 AC128657.1-201ENST00000549459 145 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 AL596327.1-201ENST00000603629 213 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AC087241.4-201ENST00000612441 480 ntBASIC3.38□□□□□ -1.87
CLK1P49759 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.38□□□□□ -1.87
CLK1P49759 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CLK1P49759 MIR4275-201ENST00000636486 87 ntBASIC3.38□□□□□ -1.87
CLK1P49759 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLK1P49759 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLK1P49759 MTCO1P9-201ENST00000505577 1534 ntBASIC3.38□□□□□ -1.87
CLK1P49759 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLK1P49759 PABPC1P9-201ENST00000426076 1612 ntBASIC3.37□□□□□ -1.87
CLK1P49759 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLK1P49759 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLK1P49759 Y_RNA.41-201ENST00000362646 102 ntBASIC3.37□□□□□ -1.87
CLK1P49759 RNA5SP88-201ENST00000365560 109 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms