Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PRIM1P49642 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PRIM1P49642 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 DNM1P47-203ENST00000571780 12667 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 AP000560.1-201ENST00000624150 1937 ntBASIC6.72□□□□□ -1.33
PRIM1P49642 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PRIM1P49642 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PRIM1P49642 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.72□□□□□ -1.33
PRIM1P49642 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
PRIM1P49642 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PRIM1P49642 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.71□□□□□ -1.33
PRIM1P49642 AL606537.1-201ENST00000607258 2011 ntBASIC6.71□□□□□ -1.33
PRIM1P49642 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRIM1P49642 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRIM1P49642 AL359854.1-201ENST00000614203 1594 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 Y_RNA.48-201ENST00000362710 103 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 RNU6-1266P-201ENST00000362794 105 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 MIR613-201ENST00000385248 95 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 Y_RNA.592-201ENST00000410274 109 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 RNU6-1140P-201ENST00000410517 106 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 AC012123.2-201ENST00000485809 248 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 AC091912.1-201ENST00000511351 248 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 AC067942.3-201ENST00000512025 362 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 RNU6-390P-201ENST00000516259 103 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 CPDP1-201ENST00000579660 283 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.71□□□□□ -1.34
PRIM1P49642 MIR6133-201ENST00000617057 108 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRIM1P49642 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.71□□□□□ -1.34
PRIM1P49642 MAPK10-338ENST00000641647 3362 ntBASIC6.71□□□□□ -1.34
PRIM1P49642 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRIM1P49642 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PRIM1P49642 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
PRIM1P49642 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PRIM1P49642 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRIM1P49642 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRIM1P49642 AC009229.4-201ENST00000623854 1947 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PRIM1P49642 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRIM1P49642 AC027228.2-201ENST00000567141 2154 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PRIM1P49642 Y_RNA.105-201ENST00000363182 111 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 Y_RNA.269-201ENST00000364685 89 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 SNORD50.2-201ENST00000365465 70 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 RNY1P5-201ENST00000383890 115 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AL513475.1-201ENST00000406602 315 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.7□□□□□ -1.34
PRIM1P49642 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.7□□□□□ -1.34
PRIM1P49642 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.7□□□□□ -1.34
PRIM1P49642 AC133134.1-201ENST00000466800 359 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AC110792.1-201ENST00000491826 472 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.7□□□□□ -1.34
PRIM1P49642 RN7SKP82-201ENST00000516786 223 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.7□□□□□ -1.34
PRIM1P49642 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.7□□□□□ -1.34
PRIM1P49642 DEFB108E-201ENST00000524692 240 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AL358913.1-201ENST00000554342 121 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 MIR5701-3-201ENST00000578890 82 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 MIR5701-1-201ENST00000585138 82 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.7□□□□□ -1.34
PRIM1P49642 AL034351.1-201ENST00000605288 668 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AC006329.2-201ENST00000611491 394 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 MIR5701-2-201ENST00000615634 82 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AL031601.2-202ENST00000622650 282 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 AL450472.1-202ENST00000637286 180 ntBASIC6.7□□□□□ -1.34
PRIM1P49642 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PRIM1P49642 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PRIM1P49642 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.7□□□□□ -1.34
PRIM1P49642 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.7□□□□□ -1.34
PRIM1P49642 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PRIM1P49642 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PRIM1P49642 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PRIM1P49642 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PRIM1P49642 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PRIM1P49642 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PRIM1P49642 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PRIM1P49642 Y_RNA.199-201ENST00000364014 102 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 RNU6-371P-201ENST00000364283 108 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 U3.13-201ENST00000364804 214 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 SNORD115-46-201ENST00000390982 71 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.69□□□□□ -1.34
PRIM1P49642 AC079809.1-201ENST00000415468 276 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 DPPA2P2-201ENST00000418220 897 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.69□□□□□ -1.34
PRIM1P49642 AC016065.2-201ENST00000514530 444 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 IGKV2-38-201ENST00000517443 247 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.69□□□□□ -1.34
PRIM1P49642 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.69□□□□□ -1.34
PRIM1P49642 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.69□□□□□ -1.34
PRIM1P49642 ATP5J2P6-201ENST00000565203 266 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 Z83818.1-201ENST00000603584 150 ntBASIC6.69□□□□□ -1.34
PRIM1P49642 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms