Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 Y_RNA.25-201ENST00000362528 102 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RNU5D-1-201ENST00000363299 116 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RNU5E-10P-201ENST00000363506 118 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 Y_RNA.408-201ENST00000383987 102 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 MIR122-201ENST00000385044 85 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 MIR620-201ENST00000385232 95 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 SNORA40.2-201ENST00000390847 128 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RPL21P75-201ENST00000396599 483 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RPL21P28-201ENST00000401418 483 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AL592114.1-201ENST00000403842 483 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AL450338.1-201ENST00000407987 512 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL12P48061 MTCO3P12-201ENST00000416718 547 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.42□□□□□ -2.02
CXCL12P48061 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL12P48061 SAR1AP4-201ENST00000429225 591 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.42□□□□□ -2.02
CXCL12P48061 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL12P48061 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 COX6CP2-201ENST00000444980 225 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 CACYBPP2-201ENST00000453625 678 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 PNPLA4P1-201ENST00000458328 305 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RPL21P39-201ENST00000463605 483 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC011979.1-201ENST00000472300 483 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RPL21P93-201ENST00000480465 489 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC233702.1-201ENST00000482905 502 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC087190.1-201ENST00000484462 480 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC093591.1-201ENST00000491435 481 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RPL21P16-201ENST00000495531 483 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 KLRA1P-201ENST00000503499 986 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL12P48061 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL12P48061 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.42□□□□□ -2.02
CXCL12P48061 AC026412.2-201ENST00000512270 1075 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 RN7SKP31-201ENST00000516354 278 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL12P48061 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.42□□□□□ -2.02
CXCL12P48061 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.42□□□□□ -2.02
CXCL12P48061 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.42□□□□□ -2.02
CXCL12P48061 EEF1B2P4-201ENST00000551398 348 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL12P48061 AC012182.1-201ENST00000570133 895 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 VN1R83P-201ENST00000595685 445 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 BNIP3P27-201ENST00000599991 412 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC010620.2-201ENST00000600135 313 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC069545.1-201ENST00000605671 358 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL12P48061 PART1_2.1-201ENST00000612397 250 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL12P48061 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 AL353997.5-201ENST00000618886 171 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 U6.101-201ENST00000637707 76 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.42□□□□□ -2.02
CXCL12P48061 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL12P48061 AC107982.1-201ENST00000507171 1300 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 MTND4P9-201ENST00000507819 1346 ntBASIC2.42□□□□□ -2.02
CXCL12P48061 SNORA51.4-201ENST00000364993 124 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CXCL12P48061 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 Y_RNA.472-201ENST00000384322 102 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 RNA5SP210-201ENST00000391034 120 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC109780.2-201ENST00000413467 845 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC007435.1-201ENST00000421086 415 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 PSMA6P3-201ENST00000428242 164 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL12P48061 USP9YP22-201ENST00000438971 294 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 MTCO1P53-201ENST00000441633 699 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 FCF1P6-201ENST00000456841 595 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL12P48061 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC113420.1-201ENST00000507903 571 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 MTCYBP16-201ENST00000509187 1129 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.41□□□□□ -2.02
CXCL12P48061 Y_RNA.676-201ENST00000516393 96 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 AP000857.1-201ENST00000532151 543 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AP000867.2-201ENST00000532468 320 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC125611.1-201ENST00000549563 229 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 SETP2-201ENST00000553886 926 ntBASIC2.41□□□□□ -2.02
CXCL12P48061 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL12P48061 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL12P48061 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.41□□□□□ -2.02
CXCL12P48061 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms