Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CRYM-AS1-204ENST00000637983 556 ntBASIC2.85□□□□□ -1.95
SSR1P43307 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
SSR1P43307 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSR1P43307 RNU1-105P-201ENST00000363470 161 ntBASIC2.84□□□□□ -1.95
SSR1P43307 RNA5SP387-201ENST00000364226 106 ntBASIC2.84□□□□□ -1.95
SSR1P43307 MIR325-201ENST00000385260 98 ntBASIC2.84□□□□□ -1.95
SSR1P43307 RNU6-298P-201ENST00000390888 96 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
SSR1P43307 RNU2-43P-201ENST00000410306 190 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AL139421.1-201ENST00000423010 169 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AC009414.1-201ENST00000427200 443 ntBASIC2.84□□□□□ -1.95
SSR1P43307 GTF2IP7-202ENST00000436677 309 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AC008427.1-201ENST00000503102 655 ntBASIC2.84□□□□□ -1.95
SSR1P43307 HMGB1P28-201ENST00000507778 552 ntBASIC2.84□□□□□ -1.95
SSR1P43307 RNU6-798P-201ENST00000516912 103 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AC109329.2-201ENST00000519658 482 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AC090136.1-201ENST00000520009 240 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.84□□□□□ -1.95
SSR1P43307 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.84□□□□□ -1.95
SSR1P43307 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.84□□□□□ -1.95
SSR1P43307 DUXAP11-201ENST00000603858 526 ntBASIC2.84□□□□□ -1.95
SSR1P43307 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSR1P43307 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.84□□□□□ -1.95
SSR1P43307 AP000254.1-201ENST00000609934 520 ntBASIC2.84□□□□□ -1.95
SSR1P43307 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
SSR1P43307 AL450472.3-201ENST00000615578 367 ntBASIC2.84□□□□□ -1.95
SSR1P43307 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SSR1P43307 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSR1P43307 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.83□□□□□ -1.96
SSR1P43307 RNU6-216P-201ENST00000363282 104 ntBASIC2.83□□□□□ -1.96
SSR1P43307 RNU6-343P-201ENST00000364709 104 ntBASIC2.83□□□□□ -1.96
SSR1P43307 RNU6-198P-201ENST00000384258 104 ntBASIC2.83□□□□□ -1.96
SSR1P43307 SNORA44-201ENST00000384584 132 ntBASIC2.83□□□□□ -1.96
SSR1P43307 MTND4P3-201ENST00000417829 541 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.83□□□□□ -1.96
SSR1P43307 RPL27AP8-201ENST00000424277 446 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.83□□□□□ -1.96
SSR1P43307 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 AL049874.1-201ENST00000489560 388 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.83□□□□□ -1.96
SSR1P43307 AC117522.3-201ENST00000507974 584 ntBASIC2.83□□□□□ -1.96
SSR1P43307 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.83□□□□□ -1.96
SSR1P43307 TTC39CP1-201ENST00000512513 755 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 RNU6-928P-201ENST00000516876 104 ntBASIC2.83□□□□□ -1.96
SSR1P43307 COX6CP5-201ENST00000527162 228 ntBASIC2.83□□□□□ -1.96
SSR1P43307 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.83□□□□□ -1.96
SSR1P43307 MTND3P13-201ENST00000574391 343 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.83□□□□□ -1.96
SSR1P43307 MIR4637-201ENST00000582405 84 ntBASIC2.83□□□□□ -1.96
SSR1P43307 MIR4635-201ENST00000583759 79 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AL451007.1-201ENST00000595491 289 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AL390208.1-201ENST00000605885 644 ntBASIC2.83□□□□□ -1.96
SSR1P43307 MIR6840-201ENST00000611937 71 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AC104985.3-201ENST00000623479 597 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AL138960.2-201ENST00000625145 535 ntBASIC2.83□□□□□ -1.96
SSR1P43307 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.83□□□□□ -1.96
SSR1P43307 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.83□□□□□ -1.96
SSR1P43307 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSR1P43307 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SSR1P43307 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SSR1P43307 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SSR1P43307 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
SSR1P43307 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSR1P43307 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSR1P43307 AL596028.1-201ENST00000326971 197 ntBASIC2.82□□□□□ -1.96
SSR1P43307 ANKRD36P1-201ENST00000344424 659 ntBASIC2.82□□□□□ -1.96
SSR1P43307 RNU6-236P-201ENST00000363886 106 ntBASIC2.82□□□□□ -1.96
SSR1P43307 RNU1-112P-201ENST00000364401 164 ntBASIC2.82□□□□□ -1.96
SSR1P43307 Y_RNA.333-201ENST00000365274 102 ntBASIC2.82□□□□□ -1.96
SSR1P43307 SNORA6-201ENST00000384033 151 ntBASIC2.82□□□□□ -1.96
SSR1P43307 MIR128-1-201ENST00000384921 82 ntBASIC2.82□□□□□ -1.96
SSR1P43307 MTCO1P56-201ENST00000401674 224 ntBASIC2.82□□□□□ -1.96
SSR1P43307 AL356131.1-201ENST00000405826 414 ntBASIC2.82□□□□□ -1.96
SSR1P43307 BEND7P1-201ENST00000422058 457 ntBASIC2.82□□□□□ -1.96
SSR1P43307 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.82□□□□□ -1.96
SSR1P43307 BX119904.4-201ENST00000424402 301 ntBASIC2.82□□□□□ -1.96
SSR1P43307 MTCO3P30-201ENST00000426425 670 ntBASIC2.82□□□□□ -1.96
SSR1P43307 RPL7L1P10-201ENST00000427790 463 ntBASIC2.82□□□□□ -1.96
SSR1P43307 AC112220.1-201ENST00000434628 355 ntBASIC2.82□□□□□ -1.96
SSR1P43307 UBE2V1P13-201ENST00000436983 439 ntBASIC2.82□□□□□ -1.96
SSR1P43307 RPS3AP12-201ENST00000443616 753 ntBASIC2.82□□□□□ -1.96
SSR1P43307 MTCYBP11-201ENST00000447254 1109 ntBASIC2.82□□□□□ -1.96
SSR1P43307 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.82□□□□□ -1.96
SSR1P43307 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.82□□□□□ -1.96
SSR1P43307 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.82□□□□□ -1.96
SSR1P43307 AL049714.1-201ENST00000466686 347 ntBASIC2.82□□□□□ -1.96
SSR1P43307 AC090453.1-201ENST00000495560 436 ntBASIC2.82□□□□□ -1.96
SSR1P43307 EIF4EP3-201ENST00000498782 656 ntBASIC2.82□□□□□ -1.96
SSR1P43307 AC098799.1-201ENST00000504752 800 ntBASIC2.82□□□□□ -1.96
SSR1P43307 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.82□□□□□ -1.96
SSR1P43307 HIGD1AP13-201ENST00000509878 289 ntBASIC2.82□□□□□ -1.96
SSR1P43307 RNU6-1225P-201ENST00000516336 65 ntBASIC2.82□□□□□ -1.96
SSR1P43307 RNU6-467P-201ENST00000517027 110 ntBASIC2.82□□□□□ -1.96
SSR1P43307 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms