Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.94□□□□□ -1.78
CIITAP33076 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.94□□□□□ -1.78
CIITAP33076 AL589872.1-201ENST00000426602 288 ntBASIC3.94□□□□□ -1.78
CIITAP33076 EZH2P1-201ENST00000431167 291 ntBASIC3.94□□□□□ -1.78
CIITAP33076 RBMX2P4-201ENST00000441256 376 ntBASIC3.94□□□□□ -1.78
CIITAP33076 RPL17P49-201ENST00000443728 411 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.94□□□□□ -1.78
CIITAP33076 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.94□□□□□ -1.78
CIITAP33076 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.94□□□□□ -1.78
CIITAP33076 snoU109.4-201ENST00000458953 143 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC104563.1-201ENST00000476147 376 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AP001086.1-201ENST00000494882 321 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.94□□□□□ -1.78
CIITAP33076 AC026784.1-201ENST00000507986 352 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC022483.1-201ENST00000514020 567 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.94□□□□□ -1.78
CIITAP33076 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CIITAP33076 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.94□□□□□ -1.78
CIITAP33076 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.94□□□□□ -1.78
CIITAP33076 AC124947.2-202ENST00000552735 133 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.94□□□□□ -1.78
CIITAP33076 MIR4738-201ENST00000579134 87 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.94□□□□□ -1.78
CIITAP33076 AC067852.3-201ENST00000589177 561 ntBASIC3.94□□□□□ -1.78
CIITAP33076 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.94□□□□□ -1.78
CIITAP33076 AC022149.2-201ENST00000621061 203 ntBASIC3.94□□□□□ -1.78
CIITAP33076 AC138649.3-201ENST00000622154 254 ntBASIC3.94□□□□□ -1.78
CIITAP33076 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CIITAP33076 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CIITAP33076 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CIITAP33076 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CIITAP33076 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.93□□□□□ -1.78
CIITAP33076 U3.29-201ENST00000391296 212 ntBASIC3.93□□□□□ -1.78
CIITAP33076 RPL17P50-201ENST00000396131 546 ntBASIC3.93□□□□□ -1.78
CIITAP33076 RPS3AP36-201ENST00000398190 775 ntBASIC3.93□□□□□ -1.78
CIITAP33076 RNU4-78P-201ENST00000410940 126 ntBASIC3.93□□□□□ -1.78
CIITAP33076 RNU6-195P-201ENST00000411352 109 ntBASIC3.93□□□□□ -1.78
CIITAP33076 MTATP6P27-201ENST00000416987 621 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC068533.1-201ENST00000418542 415 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 UBE2V1P8-201ENST00000437166 265 ntBASIC3.93□□□□□ -1.78
CIITAP33076 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 PRDX3P3-201ENST00000447765 522 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 AC025518.1-201ENST00000479856 347 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC092451.1-201ENST00000480211 153 ntBASIC3.93□□□□□ -1.78
CIITAP33076 MTND1P3-201ENST00000484956 952 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AP001025.2-201ENST00000490908 477 ntBASIC3.93□□□□□ -1.78
CIITAP33076 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CIITAP33076 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 AC006390.1-201ENST00000508068 283 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 RNU6-714P-201ENST00000516963 103 ntBASIC3.93□□□□□ -1.78
CIITAP33076 IGKV2-26-201ENST00000518305 343 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC109635.4-202ENST00000531666 412 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 UBE2L4-201ENST00000587688 464 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC103710.3-201ENST00000608157 948 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC092954.2-201ENST00000609103 430 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AL391813.2-201ENST00000609113 322 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AL590282.1-201ENST00000610379 1136 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC019176.2-201ENST00000611579 315 ntBASIC3.93□□□□□ -1.78
CIITAP33076 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.93□□□□□ -1.78
CIITAP33076 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.93□□□□□ -1.78
CIITAP33076 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.93□□□□□ -1.78
CIITAP33076 AL596245.1-201ENST00000618994 362 ntBASIC3.93□□□□□ -1.78
CIITAP33076 MIR7975-201ENST00000619350 68 ntBASIC3.93□□□□□ -1.78
CIITAP33076 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 AL158801.5-201ENST00000623123 465 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC048347.1-201ENST00000624621 427 ntBASIC3.93□□□□□ -1.78
CIITAP33076 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CIITAP33076 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
CIITAP33076 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CIITAP33076 AC092447.10-201ENST00000620607 1652 ntBASIC3.93□□□□□ -1.78
CIITAP33076 OTUD4P1-201ENST00000237841 3067 ntBASIC3.93□□□□□ -1.78
CIITAP33076 AC244517.1-201ENST00000606030 2086 ntBASIC3.93□□□□□ -1.78
CIITAP33076 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.92□□□□□ -1.78
CIITAP33076 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
CIITAP33076 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.92□□□□□ -1.78
CIITAP33076 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.92□□□□□ -1.78
CIITAP33076 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CIITAP33076 RNU6-853P-201ENST00000364306 107 ntBASIC3.92□□□□□ -1.78
CIITAP33076 RNA5SP235-201ENST00000365411 114 ntBASIC3.92□□□□□ -1.78
CIITAP33076 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CIITAP33076 MIR7-3-201ENST00000384898 110 ntBASIC3.92□□□□□ -1.78
CIITAP33076 AL583834.1-201ENST00000406943 343 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms