Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC006130.2-201ENST00000586202 326 ntBASIC4.17□□□□□ -1.74
SLC6A4P31645 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC6A4P31645 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.17□□□□□ -1.74
SLC6A4P31645 C8orf59P2-201ENST00000603441 271 ntBASIC4.17□□□□□ -1.74
SLC6A4P31645 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.17□□□□□ -1.74
SLC6A4P31645 uc_338.11-201ENST00000619132 160 ntBASIC4.17□□□□□ -1.74
SLC6A4P31645 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
SLC6A4P31645 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A4P31645 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A4P31645 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A4P31645 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
SLC6A4P31645 DDX10P1-201ENST00000448545 1933 ntBASIC4.17□□□□□ -1.74
SLC6A4P31645 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC6A4P31645 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC6A4P31645 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SLC6A4P31645 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SLC6A4P31645 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNU6-1284P-201ENST00000363701 100 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 RNU6-641P-201ENST00000384006 107 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AL136116.1-201ENST00000403591 381 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RN7SKP202-201ENST00000410439 330 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNU6-1068P-201ENST00000410958 103 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNA5SP107-201ENST00000411358 122 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RPS7P15-201ENST00000415804 584 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A4P31645 CBWD4P-201ENST00000445695 655 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A4P31645 RNU7-182P-201ENST00000459009 62 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC006517.1-201ENST00000480485 328 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC233702.1-201ENST00000482905 502 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RPS3AP50-201ENST00000487064 803 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A4P31645 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A4P31645 AC116562.3-201ENST00000506136 177 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A4P31645 AC026801.2-201ENST00000515352 425 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNU6-1095P-201ENST00000516148 108 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNA5SP154-201ENST00000516193 111 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNU6-64P-201ENST00000517119 105 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 FAM60DP-201ENST00000524174 632 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC068587.5-201ENST00000528506 175 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A4P31645 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC6A4P31645 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A4P31645 CYP4A43P-201ENST00000568156 121 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
SLC6A4P31645 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC6A4P31645 AL117336.2-201ENST00000602435 335 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 RNA5SP108-201ENST00000605921 117 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 AC079684.1-201ENST00000621405 437 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 MIR6500-201ENST00000622700 86 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC6A4P31645 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC6A4P31645 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC6A4P31645 RIOK3P1-201ENST00000418778 1528 ntBASIC4.16□□□□□ -1.74
SLC6A4P31645 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A4P31645 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A4P31645 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.15□□□□□ -1.74
SLC6A4P31645 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.74
SLC6A4P31645 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A4P31645 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SLC6A4P31645 NACAP2-201ENST00000318548 624 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC6A4P31645 RNU6-263P-201ENST00000363811 107 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 SNORA62.3-201ENST00000365110 153 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 RNU6-767P-201ENST00000384132 107 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AL591416.1-201ENST00000404015 867 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 RPL36AP53-201ENST00000432891 316 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC6A4P31645 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC6A4P31645 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 CACYBPP2-201ENST00000453625 678 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 snoU13.22-201ENST00000459428 104 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AC006512.1-201ENST00000468816 291 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 RN7SL585P-201ENST00000470538 280 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 VN1R105P-201ENST00000486595 910 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC6A4P31645 AC025445.1-201ENST00000502728 300 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 HMGB1P41-201ENST00000520234 440 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.15□□□□□ -1.75
SLC6A4P31645 RAB11AP2-201ENST00000545905 639 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.15□□□□□ -1.75
SLC6A4P31645 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SLC6A4P31645 AC053481.4-201ENST00000583164 216 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AC087045.1-201ENST00000605856 382 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AC233309.1-201ENST00000619522 751 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AL136221.1-201ENST00000621449 509 ntBASIC4.15□□□□□ -1.75
SLC6A4P31645 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms