Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
COL4A5P29400 AC093536.2-201ENST00000565257 1406 ntBASIC1.97□□□□□ -2.09
COL4A5P29400 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL4A5P29400 RN7SKP101-201ENST00000411376 320 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 MTCYBP31-201ENST00000438855 1122 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 AC104689.1-201ENST00000473356 768 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 RNA5SP102-201ENST00000516865 106 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.96□□□□□ -2.1
COL4A5P29400 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.96□□□□□ -2.1
COL4A5P29400 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.96□□□□□ -2.1
COL4A5P29400 MIR4421-201ENST00000578133 69 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 MIR6734-201ENST00000621166 68 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL4A5P29400 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL4A5P29400 AC012321.1-201ENST00000561622 1588 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 AP000567.1-201ENST00000406413 156 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 XKRYP4-201ENST00000414395 483 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 RAD23BP2-201ENST00000416003 1207 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.96□□□□□ -2.1
COL4A5P29400 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
COL4A5P29400 XKRYP5-201ENST00000449659 483 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 Z99714.1-201ENST00000450463 807 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 RPL21P134-201ENST00000453468 483 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.96□□□□□ -2.1
COL4A5P29400 AC025459.1-201ENST00000504072 156 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.96□□□□□ -2.1
COL4A5P29400 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.96□□□□□ -2.1
COL4A5P29400 AC104986.1-201ENST00000517978 436 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 SYF2P1-201ENST00000550658 413 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.96□□□□□ -2.1
COL4A5P29400 AC025016.1-201ENST00000616746 682 ntBASIC1.96□□□□□ -2.1
COL4A5P29400 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.96□□□□□ -2.1
COL4A5P29400 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COL4A5P29400 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A5P29400 ZNF876P-202ENST00000398732 1485 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 PABPC1P7-201ENST00000413177 1513 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
COL4A5P29400 SNORD48-201ENST00000364953 64 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 RNU6-629P-201ENST00000384061 103 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 RNU6-98P-201ENST00000384173 107 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A5P29400 PAICSP7-201ENST00000419829 962 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 MTCYBP24-201ENST00000420387 1106 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 WARS2P1-201ENST00000429678 537 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A5P29400 RPL7P29-201ENST00000437151 728 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A5P29400 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A5P29400 RNU1-123P-201ENST00000458950 160 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 NCOR1P1-202ENST00000486162 291 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 AC006483.1-201ENST00000487308 313 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 MTCYBP37-201ENST00000510642 1133 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
COL4A5P29400 RNA5SP220-201ENST00000516298 104 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 AC004923.2-201ENST00000529649 369 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A5P29400 AC005951.1-201ENST00000576706 485 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 MIR4474-201ENST00000579189 78 ntBASIC1.95□□□□□ -2.1
COL4A5P29400 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A5P29400 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A5P29400 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.95□□□□□ -2.1
COL4A5P29400 Y_RNA.354-201ENST00000365448 111 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A5P29400 TAS2R15P-201ENST00000390674 928 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 MCTS2P-201ENST00000394552 546 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.94□□□□□ -2.1
COL4A5P29400 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A5P29400 RPL7P46-201ENST00000425129 740 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 Z85994.2-201ENST00000434327 452 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 MTND2P21-201ENST00000436242 1042 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AC017099.1-201ENST00000448261 1028 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AC092155.2-201ENST00000454675 477 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
COL4A5P29400 AC010301.1-201ENST00000473936 355 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A5P29400 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A5P29400 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A5P29400 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A5P29400 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 C1DP5-201ENST00000525775 383 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A5P29400 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A5P29400 AC018618.2-201ENST00000604770 446 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AL121917.1-203ENST00000605534 577 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AC016877.3-201ENST00000606778 504 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AC011890.2-201ENST00000613393 294 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A5P29400 AC110774.1-201ENST00000623567 2018 ntBASIC1.94□□□□□ -2.1
COL4A5P29400 MTATP6P31-201ENST00000406985 692 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A5P29400 AC006548.1-201ENST00000427470 102 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A5P29400 SNRPEP4-201ENST00000435815 279 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A5P29400 AC004062.1-201ENST00000509926 645 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AC108157.1-201ENST00000510511 539 ntBASIC1.93□□□□□ -2.1
COL4A5P29400 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms