Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.43□□□□□ -2.18
TPRP12270 RPL23AP7-203ENST00000449021 469 ntBASIC1.43□□□□□ -2.18
TPRP12270 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.43□□□□□ -2.18
TPRP12270 SUB1P4-201ENST00000566062 339 ntBASIC1.43□□□□□ -2.18
TPRP12270 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.43□□□□□ -2.18
TPRP12270 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.42□□□□□ -2.18
TPRP12270 AC099336.2-201ENST00000422457 254 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.42□□□□□ -2.18
TPRP12270 AL078601.1-201ENST00000444542 271 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC009961.3-201ENST00000449832 765 ntBASIC1.42□□□□□ -2.18
TPRP12270 RPL7P31-201ENST00000450192 724 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC078918.1-201ENST00000498515 228 ntBASIC1.42□□□□□ -2.18
TPRP12270 SNORA31.11-201ENST00000516528 139 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.42□□□□□ -2.18
TPRP12270 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.42□□□□□ -2.18
TPRP12270 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.42□□□□□ -2.18
TPRP12270 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TPRP12270 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.42□□□□□ -2.18
TPRP12270 HMGB1P5-201ENST00000255320 642 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC109583.1-201ENST00000432156 268 ntBASIC1.42□□□□□ -2.18
TPRP12270 COX6CP12-201ENST00000446748 202 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC012170.1-201ENST00000495139 359 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC105313.1-201ENST00000509121 353 ntBASIC1.42□□□□□ -2.18
TPRP12270 AC112191.3-201ENST00000604371 277 ntBASIC1.42□□□□□ -2.18
TPRP12270 uc_338.12-201ENST00000616344 181 ntBASIC1.42□□□□□ -2.18
TPRP12270 AP000553.5-201ENST00000641933 54 ntBASIC1.42□□□□□ -2.18
TPRP12270 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
TPRP12270 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TPRP12270 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TPRP12270 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.41□□□□□ -2.18
TPRP12270 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.41□□□□□ -2.18
TPRP12270 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.41□□□□□ -2.18
TPRP12270 HMGB1P45-201ENST00000435986 653 ntBASIC1.41□□□□□ -2.18
TPRP12270 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.41□□□□□ -2.18
TPRP12270 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.41□□□□□ -2.18
TPRP12270 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.41□□□□□ -2.18
TPRP12270 AC098657.3-201ENST00000620434 263 ntBASIC1.41□□□□□ -2.18
TPRP12270 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.41□□□□□ -2.18
TPRP12270 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TPRP12270 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TPRP12270 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
TPRP12270 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TPRP12270 UBE2L2-201ENST00000254302 429 ntBASIC1.41□□□□□ -2.18
TPRP12270 SNORD56.5-201ENST00000364281 72 ntBASIC1.41□□□□□ -2.18
TPRP12270 SSXP9-201ENST00000417503 292 ntBASIC1.41□□□□□ -2.18
TPRP12270 HMGN2P18-201ENST00000450680 270 ntBASIC1.41□□□□□ -2.18
TPRP12270 MTND5P4-201ENST00000514978 288 ntBASIC1.41□□□□□ -2.18
TPRP12270 RNA5SP436-201ENST00000516020 115 ntBASIC1.41□□□□□ -2.18
TPRP12270 RNU6-405P-201ENST00000516637 110 ntBASIC1.41□□□□□ -2.18
TPRP12270 RNU6-467P-201ENST00000517027 110 ntBASIC1.41□□□□□ -2.18
TPRP12270 RNA5SP330-201ENST00000517096 96 ntBASIC1.41□□□□□ -2.18
TPRP12270 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.41□□□□□ -2.18
TPRP12270 AC007375.1-201ENST00000554513 578 ntBASIC1.41□□□□□ -2.18
TPRP12270 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.41□□□□□ -2.18
TPRP12270 AC084757.1-201ENST00000559987 490 ntBASIC1.41□□□□□ -2.18
TPRP12270 AC024614.2-201ENST00000577584 372 ntBASIC1.41□□□□□ -2.18
TPRP12270 AL355596.1-201ENST00000565399 3996 ntBASIC1.41□□□□□ -2.18
TPRP12270 RNU6-1320P-201ENST00000390838 107 ntBASIC1.4□□□□□ -2.19
TPRP12270 RNU6-1269P-201ENST00000391139 107 ntBASIC1.4□□□□□ -2.19
TPRP12270 RN7SKP200-201ENST00000410564 320 ntBASIC1.4□□□□□ -2.19
TPRP12270 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.4□□□□□ -2.19
TPRP12270 WARS2P1-201ENST00000429678 537 ntBASIC1.4□□□□□ -2.19
TPRP12270 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.4□□□□□ -2.19
TPRP12270 VN1R96P-201ENST00000446052 858 ntBASIC1.4□□□□□ -2.19
TPRP12270 RNU6-599P-201ENST00000459383 107 ntBASIC1.4□□□□□ -2.19
TPRP12270 RNU6-1193P-201ENST00000459461 107 ntBASIC1.4□□□□□ -2.19
TPRP12270 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.4□□□□□ -2.19
TPRP12270 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.4□□□□□ -2.19
TPRP12270 FABP5P6-201ENST00000510588 409 ntBASIC1.4□□□□□ -2.19
TPRP12270 AC139103.1-201ENST00000534696 1030 ntBASIC1.4□□□□□ -2.19
TPRP12270 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.4□□□□□ -2.19
TPRP12270 RNU6-368P-201ENST00000620928 107 ntBASIC1.4□□□□□ -2.19
TPRP12270 RNU6-538P-201ENST00000622329 107 ntBASIC1.4□□□□□ -2.19
TPRP12270 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TPRP12270 Y_RNA.85-201ENST00000363014 111 ntBASIC1.4□□□□□ -2.19
TPRP12270 AL445183.3-201ENST00000414168 502 ntBASIC1.4□□□□□ -2.19
TPRP12270 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.4□□□□□ -2.19
TPRP12270 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.4□□□□□ -2.19
TPRP12270 USP9YP10-201ENST00000454868 628 ntBASIC1.4□□□□□ -2.19
TPRP12270 AC023424.2-201ENST00000493479 777 ntBASIC1.4□□□□□ -2.19
TPRP12270 MTCYBP37-201ENST00000510642 1133 ntBASIC1.4□□□□□ -2.19
TPRP12270 DNAJC8P1-201ENST00000554535 372 ntBASIC1.4□□□□□ -2.19
TPRP12270 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.4□□□□□ -2.19
TPRP12270 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.4□□□□□ -2.19
TPRP12270 MIR4419B-201ENST00000577260 68 ntBASIC1.4□□□□□ -2.19
TPRP12270 RPL23AP78-201ENST00000599928 470 ntBASIC1.4□□□□□ -2.19
TPRP12270 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.4□□□□□ -2.19
TPRP12270 MIR373-201ENST00000362273 69 ntBASIC1.39□□□□□ -2.19
TPRP12270 MCTS2P-201ENST00000394552 546 ntBASIC1.39□□□□□ -2.19
TPRP12270 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.39□□□□□ -2.19
TPRP12270 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.39□□□□□ -2.19
TPRP12270 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.39□□□□□ -2.19
TPRP12270 HMGB3P21-201ENST00000452483 547 ntBASIC1.39□□□□□ -2.19
TPRP12270 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.39□□□□□ -2.19
TPRP12270 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.39□□□□□ -2.19
TPRP12270 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.39□□□□□ -2.19
TPRP12270 AC004943.3-201ENST00000624116 600 ntBASIC1.39□□□□□ -2.19
TPRP12270 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TPRP12270 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TPRP12270 Y_RNA.258-201ENST00000364613 105 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms