Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL163540.1-201ENST00000485382 386 ntBASIC2□□□□□ -2.09
COL11A1P12107 RNU6-56P-201ENST00000516986 93 ntBASIC2□□□□□ -2.09
COL11A1P12107 AC103833.1-201ENST00000517442 172 ntBASIC2□□□□□ -2.09
COL11A1P12107 AF279873.1-201ENST00000523393 313 ntBASIC2□□□□□ -2.09
COL11A1P12107 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2□□□□□ -2.09
COL11A1P12107 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2□□□□□ -2.09
COL11A1P12107 MTND2P26-201ENST00000528255 1029 ntBASIC2□□□□□ -2.09
COL11A1P12107 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2□□□□□ -2.09
COL11A1P12107 AC023158.1-201ENST00000561632 1025 ntBASIC2□□□□□ -2.09
COL11A1P12107 AC026741.1-201ENST00000605892 482 ntBASIC2□□□□□ -2.09
COL11A1P12107 VN1R74P-201ENST00000613259 503 ntBASIC2□□□□□ -2.09
COL11A1P12107 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2□□□□□ -2.09
COL11A1P12107 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2□□□□□ -2.09
COL11A1P12107 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2□□□□□ -2.09
COL11A1P12107 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.99□□□□□ -2.09
COL11A1P12107 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL11A1P12107 RNU6-252P-201ENST00000363232 107 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 SNORA25.9-201ENST00000365087 128 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
COL11A1P12107 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.99□□□□□ -2.09
COL11A1P12107 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.99□□□□□ -2.09
COL11A1P12107 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.99□□□□□ -2.09
COL11A1P12107 USP9YP15-201ENST00000442391 422 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.99□□□□□ -2.09
COL11A1P12107 RPL17P49-201ENST00000443728 411 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 AC096992.1-201ENST00000459808 709 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
COL11A1P12107 AC104564.1-201ENST00000493028 407 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL11A1P12107 AC110792.2-201ENST00000510278 224 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 Y_RNA.670-201ENST00000516255 105 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 NDUFA5P6-201ENST00000542110 379 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.99□□□□□ -2.09
COL11A1P12107 CBX3P2-202ENST00000583365 535 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.99□□□□□ -2.09
COL11A1P12107 AC090617.9-201ENST00000623751 147 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.99□□□□□ -2.09
COL11A1P12107 ZNF37BP-203ENST00000452306 1352 ntBASIC1.99□□□□□ -2.09
COL11A1P12107 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.99□□□□□ -2.09
COL11A1P12107 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL11A1P12107 RNU6-661P-201ENST00000362409 107 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 Y_RNA.122-201ENST00000363331 96 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.98□□□□□ -2.09
COL11A1P12107 RPL21P66-201ENST00000426566 466 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.98□□□□□ -2.09
COL11A1P12107 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.98□□□□□ -2.09
COL11A1P12107 AL691517.1-201ENST00000440833 1235 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 SNRPFP4-201ENST00000456366 242 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC025459.1-201ENST00000504072 156 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.98□□□□□ -2.09
COL11A1P12107 MTCYBP41-201ENST00000528913 1123 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.98□□□□□ -2.09
COL11A1P12107 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.98□□□□□ -2.09
COL11A1P12107 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.98□□□□□ -2.09
COL11A1P12107 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 AC112503.2-201ENST00000609005 552 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC110792.4-201ENST00000609843 298 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC097460.3-201ENST00000623099 442 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC106730.3-201ENST00000624568 641 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL11A1P12107 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL11A1P12107 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL11A1P12107 SET-203ENST00000372688 801 ntTSL 2 BASIC1.98□□□□□ -2.09
COL11A1P12107 RNU6-1293P-201ENST00000384077 107 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AP000275.1-201ENST00000411943 390 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL357078.2-201ENST00000416486 427 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 CDC42P1-201ENST00000456658 548 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC104689.1-201ENST00000473356 768 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 HMGB1P38-201ENST00000490557 577 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.98□□□□□ -2.09
COL11A1P12107 OR9N1P-202ENST00000494289 481 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC005840.1-201ENST00000498412 377 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 MTND3P24-201ENST00000506306 329 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.98□□□□□ -2.09
COL11A1P12107 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 C1DP5-201ENST00000525775 383 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 OR4P1P-201ENST00000530808 1136 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 OSBPL9P3-201ENST00000534523 595 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 RPS3AP4-201ENST00000555161 764 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.6-201ENST00000603753 252 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.11-201ENST00000604059 253 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.10-201ENST00000604330 253 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AC008162.1-201ENST00000604718 254 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.1-201ENST00000604752 252 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.2-201ENST00000604983 252 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.5-201ENST00000605253 252 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.4-201ENST00000605279 254 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.12-201ENST00000605291 253 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.8-201ENST00000605353 252 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.9-201ENST00000605428 253 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 AL670379.7-201ENST00000605823 252 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 U73479.1-201ENST00000618062 168 ntBASIC1.98□□□□□ -2.09
COL11A1P12107 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
COL11A1P12107 RNU6-156P-201ENST00000621869 107 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms