Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TMSB10P2-201ENST00000416049 131 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC093151.1-201ENST00000427711 313 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AF228730.2-201ENST00000438784 848 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 RPL23AP33-201ENST00000442301 452 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 ZFRP1-201ENST00000457579 2970 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 RN7SL810P-201ENST00000493031 276 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC097486.1-201ENST00000515331 210 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC103783.1-201ENST00000520506 373 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 MIR5583-1-201ENST00000580941 59 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 MIR4775-201ENST00000581168 75 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC006254.3-201ENST00000603353 884 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC062037.2-201ENST00000610137 73 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC133104.2-201ENST00000615272 193 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AC138627.2-201ENST00000624202 601 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 AL669831.3-213ENST00000636676 183 ntBASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CSB-PGBD3P0DP91 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC032011.1-201ENST00000611703 1549 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.512-201ENST00000384518 102 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.556-201ENST00000384677 113 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 RPS26P8-201ENST00000393490 348 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AL109755.1-201ENST00000401791 649 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC080125.1-201ENST00000414888 684 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 DPH3P2-201ENST00000422618 250 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AL354766.1-201ENST00000423396 542 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 RPL29P29-201ENST00000448725 423 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 RN7SL817P-201ENST00000480777 288 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC015911.1-201ENST00000495111 156 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-406P-201ENST00000516470 107 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AP000763.2-201ENST00000540641 163 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 MIR4293-201ENST00000584305 78 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 U73479.1-201ENST00000618062 168 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 U2.1-201ENST00000618978 145 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 MTCO1P24-201ENST00000515438 1558 ntBASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC6.17□□□□□ -1.42
CSB-PGBD3P0DP91 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC004817.4-201ENST00000602396 3625 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNU5E-6P-201ENST00000365574 115 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-601P-201ENST00000384540 107 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 MIR153-1-201ENST00000384914 90 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.645-201ENST00000391229 102 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 UBE2V1P2-201ENST00000397758 440 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RN7SKP16-201ENST00000410180 299 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNU4-6P-201ENST00000410804 122 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNU2-64P-201ENST00000411315 191 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 ARL5AP1-201ENST00000418991 388 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RPS12P10-201ENST00000427031 377 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 CKS1BP5-201ENST00000434172 273 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 MRPS18BP2-201ENST00000434310 759 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RPL23AP93-201ENST00000440847 484 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 MTND1P17-201ENST00000448961 204 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 PPIAP3-201ENST00000450588 505 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 PCNPP5-201ENST00000452246 481 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RPL5P30-201ENST00000465511 891 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC105137.1-201ENST00000484355 562 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 Y_RNA.661-201ENST00000516003 99 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNU6-1143P-201ENST00000516125 104 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 RNF138P2-201ENST00000603490 592 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC016727.2-201ENST00000603988 621 ntBASIC6.16□□□□□ -1.42
CSB-PGBD3P0DP91 AC104695.3-201ENST00000604052 296 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms