Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NANOGP5-201ENST00000424456 877 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AL009174.1-201ENST00000426577 416 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC024082.2-201ENST00000434771 238 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AL451074.3-201ENST00000437709 472 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.6□□□□□ -2.15
CXCL1P09341 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL1P09341 AL592447.1-201ENST00000447592 540 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AL118520.1-201ENST00000450770 291 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL1P09341 MTATP6P7-201ENST00000453315 681 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC128713.1-201ENST00000471495 306 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 RPS29P20-201ENST00000489592 171 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 MTCO2P9-201ENST00000503214 694 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC109464.2-201ENST00000510242 943 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL1P09341 AC022634.1-201ENST00000520765 532 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL1P09341 AP005902.1-201ENST00000521358 186 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.6□□□□□ -2.15
CXCL1P09341 CYCSP26-201ENST00000534107 320 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 TRAV11-201ENST00000539512 339 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC135628.1-201ENST00000568867 534 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.6□□□□□ -2.15
CXCL1P09341 VN1R90P-201ENST00000595717 726 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 BNIP3P4-201ENST00000604946 565 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 OR10AB1P-201ENST00000609613 938 ntBASIC1.6□□□□□ -2.15
CXCL1P09341 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL1P09341 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.6□□□□□ -2.15
CXCL1P09341 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CXCL1P09341 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL1P09341 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.6□□□□□ -2.15
CXCL1P09341 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CXCL1P09341 MTND4P27-201ENST00000450813 1354 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.59□□□□□ -2.15
CXCL1P09341 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.59□□□□□ -2.15
CXCL1P09341 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CXCL1P09341 XGY1-201ENST00000381172 446 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 RNU6-220P-201ENST00000390919 107 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.59□□□□□ -2.15
CXCL1P09341 AP002784.2-201ENST00000397300 549 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AL355615.1-201ENST00000406187 641 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.59□□□□□ -2.15
CXCL1P09341 SPA17P1-201ENST00000416656 452 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.59□□□□□ -2.15
CXCL1P09341 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
CXCL1P09341 RPL23AP83-201ENST00000434984 473 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.59□□□□□ -2.15
CXCL1P09341 RPS26P30-201ENST00000443431 335 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 ATG12P2-201ENST00000456830 416 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 PPP1R2P5-201ENST00000457256 603 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 SCARNA16.3-201ENST00000516595 184 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL1P09341 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL1P09341 SETP7-201ENST00000552169 453 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL1P09341 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL1P09341 AC090897.2-201ENST00000581715 130 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.59□□□□□ -2.15
CXCL1P09341 AC046143.2-201ENST00000609789 160 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 AL450472.3-201ENST00000615578 367 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CXCL1P09341 AL162373.1-201ENST00000620433 407 ntBASIC1.59□□□□□ -2.15
CXCL1P09341 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.59□□□□□ -2.15
CXCL1P09341 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
CXCL1P09341 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CXCL1P09341 GDI2P1-201ENST00000429312 1336 ntBASIC1.59□□□□□ -2.16
CXCL1P09341 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CXCL1P09341 AL049641.1-201ENST00000441055 1948 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 SNORA16B-201ENST00000364674 135 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CXCL1P09341 MIR17-201ENST00000385012 84 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 NDUFB4P4-201ENST00000404822 243 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 ZNF90P2-204ENST00000419323 1075 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC093422.3-201ENST00000428506 305 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.58□□□□□ -2.16
CXCL1P09341 CBWD4P-201ENST00000445695 655 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 BMI1P1-201ENST00000445879 941 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.58□□□□□ -2.16
CXCL1P09341 RPS3AP14-201ENST00000483907 780 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 RN7SL432P-201ENST00000484057 298 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC147055.4-201ENST00000504399 745 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 RNA5SP148-201ENST00000516527 94 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 RPL7P20-201ENST00000520308 745 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 IGJP1-201ENST00000522682 475 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC011611.5-201ENST00000552477 578 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CXCL1P09341 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.58□□□□□ -2.16
CXCL1P09341 AC005229.3-201ENST00000603438 323 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 AL450336.1-201ENST00000605180 586 ntBASIC1.58□□□□□ -2.16
CXCL1P09341 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CXCL1P09341 AP001486.3-201ENST00000615334 372 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms