Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.72□□□□□ -1.97
RETP07949 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.72□□□□□ -1.97
RETP07949 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.72□□□□□ -1.97
RETP07949 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
RETP07949 RPL7P20-201ENST00000520308 745 ntBASIC2.72□□□□□ -1.97
RETP07949 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
RETP07949 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.72□□□□□ -1.97
RETP07949 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.72□□□□□ -1.97
RETP07949 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.72□□□□□ -1.97
RETP07949 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.72□□□□□ -1.97
RETP07949 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.72□□□□□ -1.97
RETP07949 MIR5708-201ENST00000579723 85 ntBASIC2.72□□□□□ -1.97
RETP07949 MIR4666A-201ENST00000580160 79 ntBASIC2.72□□□□□ -1.97
RETP07949 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.72□□□□□ -1.97
RETP07949 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.72□□□□□ -1.97
RETP07949 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.72□□□□□ -1.97
RETP07949 AC112220.2-201ENST00000605513 533 ntBASIC2.72□□□□□ -1.97
RETP07949 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.72□□□□□ -1.97
RETP07949 SNHG22-203ENST00000617833 660 ntBASIC2.72□□□□□ -1.97
RETP07949 AC104985.3-201ENST00000623479 597 ntBASIC2.72□□□□□ -1.97
RETP07949 OR4G3P-201ENST00000633500 913 ntBASIC2.72□□□□□ -1.97
RETP07949 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.72□□□□□ -1.97
RETP07949 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RETP07949 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RETP07949 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RETP07949 RNU6-707P-201ENST00000364647 95 ntBASIC2.71□□□□□ -1.98
RETP07949 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
RETP07949 SNORA36C-201ENST00000384289 132 ntBASIC2.71□□□□□ -1.98
RETP07949 Y_RNA.578-201ENST00000390903 88 ntBASIC2.71□□□□□ -1.98
RETP07949 MTCO1P56-201ENST00000401674 224 ntBASIC2.71□□□□□ -1.98
RETP07949 RNA5SP425-201ENST00000410336 112 ntBASIC2.71□□□□□ -1.98
RETP07949 RNU2-28P-201ENST00000410457 189 ntBASIC2.71□□□□□ -1.98
RETP07949 AL135786.1-201ENST00000415892 214 ntBASIC2.71□□□□□ -1.98
RETP07949 Z98742.3-201ENST00000418637 326 ntBASIC2.71□□□□□ -1.98
RETP07949 AC106883.1-201ENST00000418805 562 ntBASIC2.71□□□□□ -1.98
RETP07949 UBE2D3P2-201ENST00000424409 445 ntBASIC2.71□□□□□ -1.98
RETP07949 GTF2IP3-201ENST00000433887 494 ntBASIC2.71□□□□□ -1.98
RETP07949 SEPT7P5-201ENST00000434048 306 ntBASIC2.71□□□□□ -1.98
RETP07949 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.71□□□□□ -1.98
RETP07949 MTCYBP34-201ENST00000439552 670 ntBASIC2.71□□□□□ -1.98
RETP07949 AC004854.1-201ENST00000440356 349 ntBASIC2.71□□□□□ -1.98
RETP07949 AL645638.1-201ENST00000440519 361 ntBASIC2.71□□□□□ -1.98
RETP07949 MTCYBP42-201ENST00000444653 1130 ntBASIC2.71□□□□□ -1.98
RETP07949 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.71□□□□□ -1.98
RETP07949 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RETP07949 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.71□□□□□ -1.98
RETP07949 AL031183.1-201ENST00000457667 207 ntBASIC2.71□□□□□ -1.98
RETP07949 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
RETP07949 AC079203.1-201ENST00000487972 404 ntBASIC2.71□□□□□ -1.98
RETP07949 UBE2V1P12-201ENST00000503954 474 ntBASIC2.71□□□□□ -1.98
RETP07949 RNU6-27P-201ENST00000516146 107 ntBASIC2.71□□□□□ -1.98
RETP07949 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.71□□□□□ -1.98
RETP07949 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RETP07949 ARL2BPP5-201ENST00000523141 481 ntBASIC2.71□□□□□ -1.98
RETP07949 UBTFL10-201ENST00000528532 562 ntBASIC2.71□□□□□ -1.98
RETP07949 DEFB130C-202ENST00000530001 230 ntBASIC2.71□□□□□ -1.98
RETP07949 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RETP07949 MIR4509-3-201ENST00000578671 94 ntBASIC2.71□□□□□ -1.98
RETP07949 MIR4509-2-201ENST00000583920 94 ntBASIC2.71□□□□□ -1.98
RETP07949 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.71□□□□□ -1.98
RETP07949 AC010620.2-201ENST00000600135 313 ntBASIC2.71□□□□□ -1.98
RETP07949 AC024060.1-201ENST00000607052 494 ntBASIC2.71□□□□□ -1.98
RETP07949 AC024560.3-201ENST00000608482 349 ntBASIC2.71□□□□□ -1.98
RETP07949 AL138880.2-201ENST00000616214 239 ntBASIC2.71□□□□□ -1.98
RETP07949 MIR4509-1-201ENST00000618224 94 ntBASIC2.71□□□□□ -1.98
RETP07949 AL355493.4-201ENST00000618530 292 ntBASIC2.71□□□□□ -1.98
RETP07949 AC109454.4-201ENST00000623411 649 ntBASIC2.71□□□□□ -1.98
RETP07949 AL512506.2-201ENST00000624472 458 ntBASIC2.71□□□□□ -1.98
RETP07949 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.71□□□□□ -1.98
RETP07949 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.71□□□□□ -1.98
RETP07949 AC090740.1-201ENST00000623193 2262 ntBASIC2.71□□□□□ -1.98
RETP07949 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
RETP07949 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
RETP07949 AC106754.1-201ENST00000562632 1513 ntBASIC2.7□□□□□ -1.98
RETP07949 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RETP07949 RNU6-1066P-201ENST00000363573 105 ntBASIC2.7□□□□□ -1.98
RETP07949 SNORA72.3-201ENST00000365074 132 ntBASIC2.7□□□□□ -1.98
RETP07949 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.7□□□□□ -1.98
RETP07949 RNU6-224P-201ENST00000384055 107 ntBASIC2.7□□□□□ -1.98
RETP07949 RNU6-1300P-201ENST00000391046 108 ntBASIC2.7□□□□□ -1.98
RETP07949 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RETP07949 AL356057.2-201ENST00000403318 432 ntBASIC2.7□□□□□ -1.98
RETP07949 AL133384.1-201ENST00000412744 351 ntBASIC2.7□□□□□ -1.98
RETP07949 AL449283.1-202ENST00000418249 604 ntBASIC2.7□□□□□ -1.98
RETP07949 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.7□□□□□ -1.98
RETP07949 AC092393.1-201ENST00000439625 742 ntBASIC2.7□□□□□ -1.98
RETP07949 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.7□□□□□ -1.98
RETP07949 AC010625.1-201ENST00000511296 403 ntBASIC2.7□□□□□ -1.98
RETP07949 RN7SKP40-201ENST00000517211 242 ntBASIC2.7□□□□□ -1.98
RETP07949 OR10V3P-201ENST00000525712 725 ntBASIC2.7□□□□□ -1.98
RETP07949 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.7□□□□□ -1.98
RETP07949 AL355836.1-201ENST00000555951 870 ntBASIC2.7□□□□□ -1.98
RETP07949 SULT1C2P1-202ENST00000562418 459 ntBASIC2.7□□□□□ -1.98
RETP07949 MIR4446-201ENST00000578505 67 ntBASIC2.7□□□□□ -1.98
RETP07949 MIR4648-201ENST00000580107 72 ntBASIC2.7□□□□□ -1.98
RETP07949 MIR3605-201ENST00000583214 100 ntBASIC2.7□□□□□ -1.98
RETP07949 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.7□□□□□ -1.98
RETP07949 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
RETP07949 AC091925.2-201ENST00000625059 256 ntBASIC2.7□□□□□ -1.98
RETP07949 AC087821.2-201ENST00000637086 450 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms