Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MT-ND1P03886 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
MT-ND1P03886 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.98□□□□□ -1.93
MT-ND1P03886 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
MT-ND1P03886 PABPC1P9-201ENST00000426076 1612 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MT-ND1P03886 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.97□□□□□ -1.93
MT-ND1P03886 RNU4-21P-201ENST00000362802 126 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 DYNLT3P1-201ENST00000378574 347 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 SNORA26.8-201ENST00000391306 124 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 RN7SKP266-201ENST00000410232 287 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 HMGB1P11-201ENST00000413899 637 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 RPS29P4-201ENST00000414733 161 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AC244505.4-201ENST00000434905 287 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 NDUFB4P6-201ENST00000436819 366 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 MTND4P32-201ENST00000437189 1237 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC091862.1-201ENST00000438016 1100 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.97□□□□□ -1.93
MT-ND1P03886 SDCBPP1-201ENST00000440192 890 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 SSXP5-201ENST00000443473 287 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AP000542.1-201ENST00000448473 371 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 FAM172BP-201ENST00000487497 1089 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 RPL21P13-201ENST00000488305 481 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC093663.1-201ENST00000497190 394 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 OR5BM1P-201ENST00000512021 366 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AP004247.1-201ENST00000531556 1289 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AC090615.1-201ENST00000577519 154 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.97□□□□□ -1.93
MT-ND1P03886 AP001004.1-201ENST00000582468 324 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AL353997.4-201ENST00000586196 166 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
MT-ND1P03886 BNIP3P23-201ENST00000599655 511 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AP000403.1-201ENST00000603349 851 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AL022161.1-201ENST00000604390 213 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AL031775.1-201ENST00000607014 887 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 U3.45-201ENST00000607547 219 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AP000254.1-201ENST00000609934 520 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 AC012442.3-202ENST00000636742 206 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MT-ND1P03886 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
MT-ND1P03886 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.97□□□□□ -1.93
MT-ND1P03886 MTND5P19-201ENST00000424872 1794 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 ELL2P3-201ENST00000457883 1602 ntBASIC2.97□□□□□ -1.93
MT-ND1P03886 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
MT-ND1P03886 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC233263.6-201ENST00000631132 1963 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
MT-ND1P03886 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MT-ND1P03886 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
MT-ND1P03886 RNU6-769P-201ENST00000384407 104 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 Z99497.1-201ENST00000421282 135 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AL365338.1-201ENST00000422282 858 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 BX119904.4-201ENST00000424402 301 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 OR2AS1P-201ENST00000427827 319 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AL365184.2-201ENST00000431139 435 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 RPL7P23-201ENST00000493874 747 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC080014.1-201ENST00000496877 1201 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC021678.1-201ENST00000505195 936 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 MTND5P4-201ENST00000514978 288 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.96□□□□□ -1.94
MT-ND1P03886 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.96□□□□□ -1.94
MT-ND1P03886 DNAJC8P1-201ENST00000554535 372 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 AC012414.6-201ENST00000568241 401 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.96□□□□□ -1.94
MT-ND1P03886 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 MIR4276-201ENST00000584832 70 ntBASIC2.96□□□□□ -1.94
MT-ND1P03886 AC006130.2-201ENST00000586202 326 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms