Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC091953.5-201ENST00000622919 233 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 CR381653.2-201ENST00000624041 768 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DQA1P01909 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.16□□□□□ -2.06
HLA-DQA1P01909 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.15□□□□□ -2.06
HLA-DQA1P01909 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 RNU6-1078P-201ENST00000364522 103 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 PIGPP2-201ENST00000411569 458 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 TXNL1P1-201ENST00000429528 554 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC091862.1-201ENST00000438016 1100 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 LSM1P1-201ENST00000438629 273 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 PRDX3P3-201ENST00000447765 522 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 MTCO1P27-201ENST00000448269 226 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC104978.1-201ENST00000449387 391 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 RN7SL601P-201ENST00000471221 293 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC021382.1-201ENST00000483523 359 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 TPT1P8-201ENST00000510120 555 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC024589.1-201ENST00000512207 263 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 TTC39CP1-201ENST00000512513 755 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC034159.1-201ENST00000513885 583 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 RN7SKP272-201ENST00000516988 232 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AL133271.1-201ENST00000538229 291 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC068313.1-201ENST00000604028 1008 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC013553.2-201ENST00000604244 589 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AL450336.1-201ENST00000605180 586 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 RPL23AP88-201ENST00000605759 454 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC090186.1-201ENST00000605991 572 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AL139418.1-201ENST00000613613 177 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AL138880.2-201ENST00000616214 239 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC099506.2-201ENST00000623074 221 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 ZNF271P-202ENST00000465539 1970 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQA1P01909 OR4G2P-202ENST00000641004 1759 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 AC005832.2-201ENST00000538921 1430 ntBASIC2.15□□□□□ -2.07
HLA-DQA1P01909 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC233263.6-201ENST00000631132 1963 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 RNU1-109P-201ENST00000383960 147 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 RNU6-83P-201ENST00000384568 112 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MIR183-201ENST00000384958 110 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MIR514A1-201ENST00000385133 98 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MIR513B-201ENST00000385136 84 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 SNORD67-201ENST00000390833 111 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MIR1289-1-201ENST00000408836 144 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 ATG3P1-201ENST00000419507 911 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC097713.2-201ENST00000430199 356 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC112653.1-201ENST00000443851 386 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC016696.1-201ENST00000446949 318 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 USP9YP10-201ENST00000454868 628 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC010099.1-201ENST00000455434 375 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC104563.1-201ENST00000476147 376 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC111000.2-201ENST00000507775 550 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC074250.1-201ENST00000511117 192 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MTCYBP43-201ENST00000513621 740 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC026801.2-201ENST00000515352 425 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AP000867.2-201ENST00000532468 320 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 CCNG2P1-201ENST00000549521 1000 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MTND4P33-201ENST00000556706 766 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 MIR3944-201ENST00000581277 108 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 BNIP3P40-201ENST00000596017 556 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AL596327.1-201ENST00000603629 213 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC112220.3-201ENST00000605502 502 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC007349.4-201ENST00000608114 532 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AC009464.1-201ENST00000615731 469 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 SNHG22-203ENST00000617833 660 ntBASIC2.14□□□□□ -2.07
HLA-DQA1P01909 AL355493.4-201ENST00000618530 292 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms