Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MTCO2P21-201ENST00000419780 677 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.16□□□□□ -1.9
PDGFBP01127 DPPA2P1-201ENST00000428060 556 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 MTND1P32-201ENST00000433043 938 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AL354941.1-201ENST00000438600 464 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AL117351.1-201ENST00000438864 766 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 RPS24P13-201ENST00000442520 397 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.16□□□□□ -1.9
PDGFBP01127 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.16□□□□□ -1.9
PDGFBP01127 EEF1E1P1-201ENST00000446998 430 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AL139824.2-201ENST00000458731 1095 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AC068724.1-201ENST00000487100 792 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
PDGFBP01127 AC006499.2-201ENST00000513470 337 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.16□□□□□ -1.9
PDGFBP01127 ELOCP32-201ENST00000548625 324 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 OR4K8P-201ENST00000578842 1048 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 MIR4524B-201ENST00000581569 115 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PDGFBP01127 AL390208.1-201ENST00000605885 644 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AL136981.2-201ENST00000617319 734 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PDGFBP01127 AL022578.1-201ENST00000439330 1433 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFBP01127 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFBP01127 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
PDGFBP01127 CR381670.1-201ENST00000624291 1693 ntBASIC3.15□□□□□ -1.9
PDGFBP01127 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFBP01127 RNU6-283P-201ENST00000364788 107 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 RNU6-1197P-201ENST00000391183 107 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.15□□□□□ -1.91
PDGFBP01127 RPS3AP24-201ENST00000407896 734 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
PDGFBP01127 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFBP01127 RPL7P36-201ENST00000444633 681 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 ANKRD26P4-201ENST00000455755 950 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 MEMO1P3-201ENST00000459811 302 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC097493.1-201ENST00000463958 372 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.15□□□□□ -1.91
PDGFBP01127 RPL30P5-201ENST00000494923 336 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC104685.1-201ENST00000502445 371 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 HSPE1P23-201ENST00000509838 286 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 HIGD1AP13-201ENST00000509878 289 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFBP01127 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFBP01127 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFBP01127 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.15□□□□□ -1.91
PDGFBP01127 MIR3609-201ENST00000582661 80 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 BBIP1P1-201ENST00000602999 279 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC079089.3-201ENST00000603094 673 ntBASIC3.15□□□□□ -1.91
PDGFBP01127 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFBP01127 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PDGFBP01127 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFBP01127 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFBP01127 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFBP01127 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFBP01127 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFBP01127 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.15□□□□□ -1.91
PDGFBP01127 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 MIR22-201ENST00000362190 85 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 RNU6-799P-201ENST00000363567 107 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 RNA5SP139-201ENST00000364340 117 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.14□□□□□ -1.91
PDGFBP01127 AL513477.1-202ENST00000417061 214 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.14□□□□□ -1.91
PDGFBP01127 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.14□□□□□ -1.91
PDGFBP01127 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.14□□□□□ -1.91
PDGFBP01127 MTCYBP45-201ENST00000435243 565 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 BX322784.1-201ENST00000455793 1077 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.14□□□□□ -1.91
PDGFBP01127 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.14□□□□□ -1.91
PDGFBP01127 AC006445.2-201ENST00000510061 472 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 AC093331.1-201ENST00000521474 169 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 AP003461.1-201ENST00000528866 78 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
PDGFBP01127 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.14□□□□□ -1.91
PDGFBP01127 HMGB1P14-201ENST00000557424 591 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 CYCSP2-201ENST00000558168 301 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.14□□□□□ -1.91
PDGFBP01127 AC012435.1-202ENST00000568772 240 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.14□□□□□ -1.91
PDGFBP01127 AC138761.3-201ENST00000579993 334 ntBASIC3.14□□□□□ -1.91
PDGFBP01127 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.14□□□□□ -1.91
PDGFBP01127 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDGFBP01127 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms