Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SNRPEP4-201ENST00000435815 279 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.03□□□□□ -2.08
CPSF4O95639 RPL23AP58-201ENST00000440453 469 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AL591719.1-201ENST00000444669 744 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 MLLT10P2-201ENST00000506434 249 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF4O95639 RNU6-1095P-201ENST00000516148 108 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF4O95639 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF4O95639 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF4O95639 AC009097.3-201ENST00000563557 1018 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC106782.4-201ENST00000568264 210 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC090079.2-201ENST00000575289 768 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 FAM60BP-201ENST00000578364 658 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC091057.2-201ENST00000602594 792 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC010738.1-201ENST00000604970 987 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 RNU6-1192P-201ENST00000612197 107 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 RNU6-489P-201ENST00000618289 107 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AL138955.1-201ENST00000622881 1040 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AP003485.1-201ENST00000625093 753 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 U6.101-201ENST00000637707 76 ntBASIC2.03□□□□□ -2.08
CPSF4O95639 AC006020.1-201ENST00000420179 1854 ntBASIC2.03□□□□□ -2.09
CPSF4O95639 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4O95639 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
CPSF4O95639 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4O95639 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CPSF4O95639 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4O95639 Y_RNA.25-201ENST00000362528 102 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RNU6-878P-201ENST00000384578 110 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RNU6-298P-201ENST00000390888 96 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 SNRPEP2-201ENST00000397592 279 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AL450338.1-201ENST00000407987 512 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RNA5SP38-201ENST00000410750 119 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 MTND4P3-201ENST00000417829 541 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4O95639 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF4O95639 USP9YP36-201ENST00000424581 829 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4O95639 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4O95639 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 GTF2IP7-202ENST00000436677 309 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 USP9YP34-201ENST00000453983 808 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4O95639 AL049873.1-201ENST00000480540 376 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RPL21P131-201ENST00000497298 483 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.02□□□□□ -2.09
CPSF4O95639 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4O95639 AC093752.1-206ENST00000511823 336 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4O95639 ERHP1-201ENST00000523006 310 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4O95639 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4O95639 AC125611.1-201ENST00000549563 229 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 MIR4446-201ENST00000578505 67 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.02□□□□□ -2.09
CPSF4O95639 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF4O95639 AL035411.2-201ENST00000604022 421 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AL160281.1-201ENST00000605307 311 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AC009237.15-201ENST00000610252 501 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4O95639 AP000720.1-201ENST00000625091 483 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 AC093591.3-201ENST00000634516 308 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4O95639 AP005901.5-201ENST00000545779 1796 ntBASIC2.02□□□□□ -2.09
CPSF4O95639 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
CPSF4O95639 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4O95639 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4O95639 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPSF4O95639 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPSF4O95639 RNU6-1027P-201ENST00000383998 107 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 RNU6-224P-201ENST00000384055 107 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 MIR506-201ENST00000384998 124 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 BTF3P7-201ENST00000407097 488 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 RNU2-42P-201ENST00000410697 113 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.01□□□□□ -2.09
CPSF4O95639 RPL7P30-201ENST00000420888 709 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AL645638.1-201ENST00000440519 361 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 RPL23AP7-203ENST00000449021 469 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CPSF4O95639 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.01□□□□□ -2.09
CPSF4O95639 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF4O95639 RPS29P12-201ENST00000460178 152 ntBASIC2.01□□□□□ -2.09
CPSF4O95639 AP000852.1-201ENST00000472460 573 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms