Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 Y_RNA.224-201ENST00000364308 111 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-1-201ENST00000383898 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-42P-201ENST00000384165 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-36P-201ENST00000384172 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-4P-201ENST00000384205 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-5P-201ENST00000384238 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-3P-201ENST00000384314 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-2-201ENST00000384627 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-9-201ENST00000384776 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-33P-201ENST00000384793 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 MIR767-201ENST00000390228 109 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ABCA1O95477 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA1O95477 AL137159.1-201ENST00000452808 512 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 AC092798.1-201ENST00000458542 409 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 AC092991.1-201ENST00000477176 376 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA1O95477 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA1O95477 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.42□□□□□ -2.18
ABCA1O95477 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.42□□□□□ -2.18
ABCA1O95477 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.42□□□□□ -2.18
ABCA1O95477 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 MIR3618-201ENST00000580330 88 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 RNU6-6P-201ENST00000606623 107 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 AC093838.1-201ENST00000613014 469 ntBASIC1.42□□□□□ -2.18
ABCA1O95477 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA1O95477 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ABCA1O95477 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ABCA1O95477 HSPE1P11-201ENST00000339579 310 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 RNU6-31P-201ENST00000384388 108 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 RNU6-244P-201ENST00000391028 104 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ABCA1O95477 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ABCA1O95477 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA1O95477 EIF1AXP1-201ENST00000419267 435 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA1O95477 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ABCA1O95477 AL513321.1-201ENST00000441175 761 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA1O95477 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA1O95477 MTCYBP17-201ENST00000503579 789 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA1O95477 GLUD1P4-201ENST00000590914 418 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 RMST_2.1-201ENST00000617263 136 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
ABCA1O95477 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA1O95477 SNORA1.3-201ENST00000384676 136 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 MIR144-201ENST00000384886 86 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 RNA5SP38-201ENST00000410750 119 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA1O95477 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA1O95477 HMGN1P7-201ENST00000491722 313 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ABCA1O95477 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.41□□□□□ -2.18
ABCA1O95477 AC087441.2-201ENST00000529141 262 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 PSMA3P-201ENST00000555485 635 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA1O95477 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA1O95477 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.41□□□□□ -2.18
ABCA1O95477 AC005021.1-201ENST00000608730 355 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 SNHG22-203ENST00000617833 660 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 AC008669.1-201ENST00000565823 2178 ntBASIC1.41□□□□□ -2.18
ABCA1O95477 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ABCA1O95477 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
ABCA1O95477 MTND4P1-201ENST00000457501 1466 ntBASIC1.4□□□□□ -2.18
ABCA1O95477 SDAD1P2-201ENST00000441308 2028 ntBASIC1.4□□□□□ -2.18
ABCA1O95477 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
ABCA1O95477 AL391987.6-201ENST00000305671 199 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
ABCA1O95477 Y_RNA.112-201ENST00000363250 102 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 DEFB109C-201ENST00000382575 264 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 DEFB109B-201ENST00000382656 264 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 TAS2R15P-201ENST00000390674 928 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 OR51B8P-201ENST00000449892 769 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AMD1P1-201ENST00000457220 922 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC021146.7-201ENST00000509604 775 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC105914.1-201ENST00000511798 226 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 OR4P1P-201ENST00000530808 1136 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ABCA1O95477 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 RNU6-1181P-201ENST00000384191 106 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.4□□□□□ -2.19
ABCA1O95477 MTCO3P4-201ENST00000419236 787 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC009237.2-201ENST00000421358 284 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 TPT1P14-201ENST00000448018 505 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.4□□□□□ -2.19
ABCA1O95477 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.4□□□□□ -2.19
ABCA1O95477 AC011604.1-201ENST00000545978 196 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.4□□□□□ -2.19
ABCA1O95477 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms