Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AL451062.2-201ENST00000427515 271 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC079780.1-201ENST00000428259 207 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 HMGB1P27-201ENST00000431429 603 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC020550.1-201ENST00000447385 163 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 VN1R34P-201ENST00000447387 883 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 RPS26P28-201ENST00000470806 348 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC074344.1-201ENST00000512823 224 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 RNU6-358P-201ENST00000516564 75 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 RNA5SP503-201ENST00000517047 117 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 PHBP17-201ENST00000528576 541 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 CBX3P5-201ENST00000552017 521 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 MED28P6-201ENST00000558776 231 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 MIR548S-201ENST00000581352 82 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC091178.1-203ENST00000584586 279 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AL020991.1-201ENST00000612314 373 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AL589994.2-201ENST00000621124 579 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AC093648.1-201ENST00000623546 606 ntBASIC4.26□□□□□ -1.73
PCDHGA12O60330 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA12O60330 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA12O60330 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 PRO1804-201ENST00000623780 2050 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 MIR554-201ENST00000384874 96 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AL160275.2-201ENST00000412010 394 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC108032.1-201ENST00000416706 207 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 AL161631.1-201ENST00000417933 486 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 SDCBPP3-201ENST00000419629 891 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 ATP5JP1-201ENST00000431631 322 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 VDAC1P3-201ENST00000434069 851 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 RN7SL132P-201ENST00000478131 296 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 VN1R105P-201ENST00000486595 910 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 OR5AL2P-201ENST00000532185 920 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 MIR4444-1-201ENST00000581696 74 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 MIR4444-2-201ENST00000584390 74 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 AP001330.4-201ENST00000604350 154 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AL365204.3-201ENST00000612448 685 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC004696.1-201ENST00000614345 607 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC025034.2-201ENST00000623264 286 ntBASIC4.25□□□□□ -1.73
PCDHGA12O60330 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA12O60330 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA12O60330 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PCDHGA12O60330 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA12O60330 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA12O60330 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA12O60330 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA12O60330 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 SNORA62.1-201ENST00000364287 154 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 RNU6-946P-201ENST00000383878 107 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 RNU6-701P-201ENST00000384059 107 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 RNA5SP171-201ENST00000391071 115 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 AC068050.1-201ENST00000394891 380 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 EIF1P3-201ENST00000423841 334 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 AL157831.1-201ENST00000426134 473 ntBASIC4.24□□□□□ -1.73
PCDHGA12O60330 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHGA12O60330 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms