Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL133383.2-201ENST00000622958 2336 ntBASIC3.27□□□□□ -1.89
PRKNO60260 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.27□□□□□ -1.89
PRKNO60260 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.27□□□□□ -1.89
PRKNO60260 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRKNO60260 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKNO60260 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRKNO60260 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRKNO60260 MTCO1P12-201ENST00000414273 1543 ntBASIC3.26□□□□□ -1.89
PRKNO60260 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRKNO60260 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PRKNO60260 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRKNO60260 RNU4-35P-201ENST00000362588 141 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RNY4P16-201ENST00000364768 94 ntBASIC3.26□□□□□ -1.89
PRKNO60260 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 U3.39-201ENST00000408569 239 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC127391.1-201ENST00000411737 98 ntBASIC3.26□□□□□ -1.89
PRKNO60260 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKNO60260 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AL159987.2-201ENST00000432754 307 ntBASIC3.26□□□□□ -1.89
PRKNO60260 MTND4LP10-201ENST00000435146 291 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC104850.1-201ENST00000435940 476 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AL451074.3-201ENST00000437709 472 ntBASIC3.26□□□□□ -1.89
PRKNO60260 MTATP6P13-201ENST00000438531 667 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 PRDX3P3-201ENST00000447765 522 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC079448.1-201ENST00000449377 373 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC093392.2-201ENST00000450682 337 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
PRKNO60260 ANP32BP2-201ENST00000454525 545 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKNO60260 RBM43P1-201ENST00000476891 1081 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RPL23AP41-201ENST00000484754 458 ntBASIC3.26□□□□□ -1.89
PRKNO60260 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AC022483.1-201ENST00000514020 567 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RNU6-314P-201ENST00000516574 104 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RNU6-579P-201ENST00000516879 102 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RNU6-798P-201ENST00000516912 103 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RNU6-528P-201ENST00000516926 100 ntBASIC3.26□□□□□ -1.89
PRKNO60260 MTND4LP26-201ENST00000518144 282 ntBASIC3.26□□□□□ -1.89
PRKNO60260 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKNO60260 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.26□□□□□ -1.89
PRKNO60260 NRBF2P1-201ENST00000587407 859 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC067852.3-201ENST00000589177 561 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC020914.4-201ENST00000597690 277 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC012669.1-201ENST00000603209 283 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AL022154.1-201ENST00000604698 785 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AF250324.2-201ENST00000608299 610 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC007684.1-201ENST00000609671 477 ntBASIC3.26□□□□□ -1.89
PRKNO60260 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 AL133173.2-201ENST00000614270 90 ntBASIC3.26□□□□□ -1.89
PRKNO60260 U6atac.1-201ENST00000616025 117 ntBASIC3.26□□□□□ -1.89
PRKNO60260 AC015967.1-201ENST00000619893 476 ntBASIC3.26□□□□□ -1.89
PRKNO60260 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 LRRC77P-213ENST00000637727 880 ntBASIC3.26□□□□□ -1.89
PRKNO60260 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRKNO60260 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 AL645937.1-201ENST00000641739 1652 ntBASIC3.26□□□□□ -1.89
PRKNO60260 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.26□□□□□ -1.89
PRKNO60260 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
PRKNO60260 AC005832.2-201ENST00000538921 1430 ntBASIC3.26□□□□□ -1.89
PRKNO60260 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PRKNO60260 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKNO60260 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PRKNO60260 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PRKNO60260 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKNO60260 FAM35DP-201ENST00000323387 2712 ntBASIC3.25□□□□□ -1.89
PRKNO60260 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
PRKNO60260 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PRKNO60260 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PRKNO60260 MIR208A-201ENST00000362287 71 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RNU5E-1-201ENST00000362477 120 ntBASIC3.25□□□□□ -1.89
PRKNO60260 SNORA63.1-201ENST00000362493 131 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RNU6-1078P-201ENST00000364522 103 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RNA5SP235-201ENST00000365411 114 ntBASIC3.25□□□□□ -1.89
PRKNO60260 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PRKNO60260 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RPL23AP32-201ENST00000395315 459 ntBASIC3.25□□□□□ -1.89
PRKNO60260 MIR548F1-201ENST00000408667 84 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RNU2-8P-201ENST00000410727 190 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RAD23BP2-201ENST00000416003 1207 ntBASIC3.25□□□□□ -1.89
PRKNO60260 RPS15AP12-201ENST00000419498 388 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AL159169.1-201ENST00000421119 127 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.25□□□□□ -1.89
PRKNO60260 AC233728.2-201ENST00000425348 757 ntBASIC3.25□□□□□ -1.89
PRKNO60260 OR4K11P-201ENST00000431829 904 ntBASIC3.25□□□□□ -1.89
PRKNO60260 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.25□□□□□ -1.89
PRKNO60260 AL138799.3-201ENST00000438968 350 ntBASIC3.25□□□□□ -1.89
PRKNO60260 USP9YP15-201ENST00000442391 422 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms