Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PROM1O43490 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PROM1O43490 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PROM1O43490 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.05□□□□□ -1.76
PROM1O43490 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 SNORA70C-201ENST00000384538 135 ntBASIC4.05□□□□□ -1.76
PROM1O43490 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PROM1O43490 RNU6-332P-201ENST00000391193 108 ntBASIC4.05□□□□□ -1.76
PROM1O43490 U3.29-201ENST00000391296 212 ntBASIC4.05□□□□□ -1.76
PROM1O43490 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 AL356432.1-201ENST00000405809 419 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC009161.1-201ENST00000417306 376 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AL161631.1-201ENST00000417933 486 ntBASIC4.05□□□□□ -1.76
PROM1O43490 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.05□□□□□ -1.76
PROM1O43490 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 AL356010.1-201ENST00000456364 102 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC079804.1-201ENST00000461922 436 ntBASIC4.05□□□□□ -1.76
PROM1O43490 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.05□□□□□ -1.76
PROM1O43490 HSPD1P15-201ENST00000505573 1122 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.05□□□□□ -1.76
PROM1O43490 IGKV2D-36-201ENST00000518643 226 ntBASIC4.05□□□□□ -1.76
PROM1O43490 BTF3P12-201ENST00000519620 469 ntBASIC4.05□□□□□ -1.76
PROM1O43490 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 AC128657.1-201ENST00000549459 145 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC078814.3-201ENST00000553036 491 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.05□□□□□ -1.76
PROM1O43490 AP001029.3-201ENST00000588063 596 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.05□□□□□ -1.76
PROM1O43490 AC007687.1-201ENST00000602704 304 ntBASIC4.05□□□□□ -1.76
PROM1O43490 IGHV3-29-201ENST00000604817 344 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC004908.2-201ENST00000609090 574 ntBASIC4.05□□□□□ -1.76
PROM1O43490 ZYXP1-201ENST00000617638 118 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC244100.1-202ENST00000621554 382 ntBASIC4.05□□□□□ -1.76
PROM1O43490 AC091925.2-201ENST00000625059 256 ntBASIC4.05□□□□□ -1.76
PROM1O43490 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.05□□□□□ -1.76
PROM1O43490 AL158163.1-201ENST00000603915 1649 ntBASIC4.05□□□□□ -1.76
PROM1O43490 OR4G1P-203ENST00000641984 1631 ntBASIC4.05□□□□□ -1.76
PROM1O43490 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
PROM1O43490 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PROM1O43490 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PROM1O43490 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PROM1O43490 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PROM1O43490 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PROM1O43490 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 Y_RNA.367-201ENST00000365544 101 ntBASIC4.04□□□□□ -1.76
PROM1O43490 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PROM1O43490 AL359837.1-201ENST00000381357 287 ntBASIC4.04□□□□□ -1.76
PROM1O43490 RNU6-606P-201ENST00000384721 111 ntBASIC4.04□□□□□ -1.76
PROM1O43490 MT-TC-201ENST00000387405 66 ntBASIC4.04□□□□□ -1.76
PROM1O43490 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PROM1O43490 AL136116.1-201ENST00000403591 381 ntBASIC4.04□□□□□ -1.76
PROM1O43490 FAT1P1-201ENST00000406588 507 ntBASIC4.04□□□□□ -1.76
PROM1O43490 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 RPS23P10-201ENST00000416185 486 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC244098.2-201ENST00000422068 99 ntBASIC4.04□□□□□ -1.76
PROM1O43490 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.04□□□□□ -1.76
PROM1O43490 AL353678.1-201ENST00000422735 741 ntBASIC4.04□□□□□ -1.76
PROM1O43490 MTCYBP8-201ENST00000422855 651 ntBASIC4.04□□□□□ -1.76
PROM1O43490 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
PROM1O43490 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.04□□□□□ -1.76
PROM1O43490 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 SNORD121B-201ENST00000458838 81 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AL163973.1-201ENST00000484753 577 ntBASIC4.04□□□□□ -1.76
PROM1O43490 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.04□□□□□ -1.76
PROM1O43490 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 AL592156.1-201ENST00000508758 304 ntBASIC4.04□□□□□ -1.76
PROM1O43490 MIR2116-201ENST00000517221 80 ntBASIC4.04□□□□□ -1.76
PROM1O43490 SUB1P1-201ENST00000524415 382 ntBASIC4.04□□□□□ -1.76
PROM1O43490 PSMA2P1-201ENST00000526365 646 ntBASIC4.04□□□□□ -1.76
PROM1O43490 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.04□□□□□ -1.76
PROM1O43490 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.04□□□□□ -1.76
PROM1O43490 AL133271.1-201ENST00000538229 291 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC023050.3-201ENST00000541142 333 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC093027.1-201ENST00000546698 429 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC034105.4-201ENST00000568304 277 ntBASIC4.04□□□□□ -1.76
PROM1O43490 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 VN1R80P-201ENST00000597126 338 ntBASIC4.04□□□□□ -1.76
PROM1O43490 ARF4P1-201ENST00000605447 541 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AL121992.2-201ENST00000606262 256 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC064836.2-201ENST00000609491 462 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC135507.2-201ENST00000612443 309 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 RMST_7.1-201ENST00000621935 268 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC090574.1-201ENST00000623186 233 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC040168.1-201ENST00000623594 991 ntBASIC4.04□□□□□ -1.76
PROM1O43490 AC090617.10-201ENST00000624308 134 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms