Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 TPT1P14-201ENST00000448018 505 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPHP1O15259 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPHP1O15259 AC004263.1-201ENST00000479327 332 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 OR2A20P-203ENST00000498397 1268 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 RNU6-1231P-201ENST00000517185 103 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP1O15259 LRRC34P1-201ENST00000542742 915 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP1O15259 AL163153.1-201ENST00000554223 283 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.1□□□□□ -1.75
NPHP1O15259 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.1□□□□□ -1.75
NPHP1O15259 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
NPHP1O15259 AC022146.1-201ENST00000595307 847 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AL357094.1-201ENST00000603845 844 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AC090132.2-201ENST00000615881 347 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 MIR6076-201ENST00000617521 113 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 AC019226.1-201ENST00000625666 515 ntBASIC4.1□□□□□ -1.75
NPHP1O15259 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.1□□□□□ -1.75
NPHP1O15259 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPHP1O15259 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NPHP1O15259 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPHP1O15259 DDX10P1-201ENST00000448545 1933 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.09□□□□□ -1.75
NPHP1O15259 RNU6-660P-201ENST00000364566 109 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 MIR514A1-201ENST00000385133 98 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.09□□□□□ -1.75
NPHP1O15259 RPL23AP39-201ENST00000415533 405 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 TMEM167AP1-201ENST00000423409 219 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 RPL23AP69-201ENST00000431134 458 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.09□□□□□ -1.75
NPHP1O15259 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.09□□□□□ -1.75
NPHP1O15259 RN7SL330P-201ENST00000469709 307 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 HMGN2P13-201ENST00000476476 274 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AL049874.1-201ENST00000489560 388 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AC009812.2-201ENST00000517657 457 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AC107934.2-201ENST00000518653 310 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.09□□□□□ -1.75
NPHP1O15259 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.09□□□□□ -1.75
NPHP1O15259 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AC093732.2-201ENST00000607950 274 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AC131159.1-201ENST00000621854 213 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 AC018692.3-201ENST00000623929 123 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPHP1O15259 AC021755.1-201ENST00000559747 1447 ntBASIC4.09□□□□□ -1.75
NPHP1O15259 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP1O15259 SNORA44-201ENST00000384584 132 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 SNORA1.3-201ENST00000384676 136 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 TAS2R15P-201ENST00000390674 928 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 RNU6-1197P-201ENST00000391183 107 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 UBE2V1P2-201ENST00000397758 440 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 RN7SKP285-201ENST00000410137 318 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 RNA5SP38-201ENST00000410750 119 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AC005005.2-201ENST00000420779 380 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 NDUFB4P7-201ENST00000423198 363 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.08□□□□□ -1.76
NPHP1O15259 RPL35AP22-201ENST00000436855 335 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP1O15259 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 AL590664.1-201ENST00000448065 339 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP1O15259 AP1S2P1-201ENST00000457344 379 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AC072039.1-201ENST00000477611 581 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AC135721.1-201ENST00000497954 479 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP1O15259 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.08□□□□□ -1.76
NPHP1O15259 RNU6-678P-201ENST00000516832 109 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP1O15259 CASP1P1-201ENST00000526345 212 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPHP1O15259 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP1O15259 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 AP001004.1-201ENST00000582468 324 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP1O15259 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.08□□□□□ -1.76
NPHP1O15259 AL353778.1-201ENST00000603149 408 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 Z99289.3-201ENST00000605586 594 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.08□□□□□ -1.76
NPHP1O15259 AC099778.2-201ENST00000610904 211 ntBASIC4.08□□□□□ -1.76
NPHP1O15259 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP1O15259 OR4G2P-202ENST00000641004 1759 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP1O15259 CCT4P2-201ENST00000233836 1548 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPHP1O15259 SNORA23-201ENST00000365128 182 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 RNU6-432P-201ENST00000384196 109 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 LARP1BP3-201ENST00000437229 869 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 RPL7P36-201ENST00000444633 681 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AL162389.1-201ENST00000449233 177 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.07□□□□□ -1.76
NPHP1O15259 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.07□□□□□ -1.76
NPHP1O15259 AC114967.1-201ENST00000504890 259 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.07□□□□□ -1.76
NPHP1O15259 SCARNA15.2-201ENST00000516409 127 ntBASIC4.07□□□□□ -1.76
NPHP1O15259 RN7SKP272-201ENST00000516988 232 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms