Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 TPMTP1-201ENST00000592307 737 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AL031775.1-201ENST00000607014 887 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AL592494.3-201ENST00000609485 464 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CACNA1AO00555 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 SNORD6-201ENST00000365444 73 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 RNU6-39P-201ENST00000384344 107 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AC004865.1-201ENST00000442276 1003 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 COX6CP12-201ENST00000446748 202 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 AC108059.3-201ENST00000456388 214 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 POU5F1P7-201ENST00000508759 541 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 USP9YP5-201ENST00000511770 630 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CACNA1AO00555 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CACNA1AO00555 AC091925.1-201ENST00000623204 462 ntBASIC1.47□□□□□ -2.17
CACNA1AO00555 BTBD10P2-201ENST00000404779 676 ntBASIC1.46□□□□□ -2.18
CACNA1AO00555 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.46□□□□□ -2.18
CACNA1AO00555 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.46□□□□□ -2.18
CACNA1AO00555 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.46□□□□□ -2.18
CACNA1AO00555 CR382285.2-201ENST00000624662 1495 ntBASIC1.46□□□□□ -2.18
CACNA1AO00555 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CACNA1AO00555 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.46□□□□□ -2.18
CACNA1AO00555 LDHBP3-201ENST00000514909 822 ntBASIC1.46□□□□□ -2.18
CACNA1AO00555 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.46□□□□□ -2.18
CACNA1AO00555 AC007375.1-201ENST00000554513 578 ntBASIC1.46□□□□□ -2.18
CACNA1AO00555 MTCO3P13-201ENST00000577757 781 ntBASIC1.46□□□□□ -2.18
CACNA1AO00555 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.46□□□□□ -2.18
CACNA1AO00555 MIR6073-201ENST00000352083 89 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC016769.3-201ENST00000396562 315 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 SNX3P1X-201ENST00000414887 175 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.45□□□□□ -2.18
CACNA1AO00555 AC069528.1-202ENST00000482888 637 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AK3P2-201ENST00000507976 429 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.45□□□□□ -2.18
CACNA1AO00555 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.45□□□□□ -2.18
CACNA1AO00555 AC024614.2-201ENST00000577584 372 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.45□□□□□ -2.18
CACNA1AO00555 AC097504.2-201ENST00000608088 454 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AP006248.2-201ENST00000623309 592 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC098679.5-201ENST00000624394 571 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC004808.1-201ENST00000627671 721 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 PABPC1P9-201ENST00000426076 1612 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC095050.2-201ENST00000510748 1458 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CACNA1AO00555 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CACNA1AO00555 Y_RNA.170-201ENST00000363746 110 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AL158823.1-201ENST00000418441 478 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC012498.1-201ENST00000424037 437 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 TPT1P14-201ENST00000448018 505 ntBASIC1.45□□□□□ -2.18
CACNA1AO00555 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.45□□□□□ -2.18
CACNA1AO00555 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.45□□□□□ -2.18
CACNA1AO00555 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.45□□□□□ -2.18
CACNA1AO00555 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.45□□□□□ -2.18
CACNA1AO00555 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.45□□□□□ -2.18
CACNA1AO00555 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CACNA1AO00555 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CACNA1AO00555 Y_RNA.35-201ENST00000362601 101 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 OR7L1P-201ENST00000456181 380 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.44□□□□□ -2.18
CACNA1AO00555 SNORA31.11-201ENST00000516528 139 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AC139103.1-201ENST00000534696 1030 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.44□□□□□ -2.18
CACNA1AO00555 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.44□□□□□ -2.18
CACNA1AO00555 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.44□□□□□ -2.18
CACNA1AO00555 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CACNA1AO00555 AC060766.3-201ENST00000591442 263 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
CACNA1AO00555 RAD1P1-201ENST00000231383 813 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 MIR1912-201ENST00000410389 80 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.44□□□□□ -2.18
CACNA1AO00555 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.44□□□□□ -2.18
CACNA1AO00555 AL353706.1-201ENST00000436728 494 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.44□□□□□ -2.18
CACNA1AO00555 HMGB3P15-201ENST00000507326 574 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.44□□□□□ -2.18
CACNA1AO00555 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.44□□□□□ -2.18
CACNA1AO00555 AC008126.1-201ENST00000549019 480 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AL391261.3-201ENST00000557194 520 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AC087468.1-201ENST00000604365 630 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.44□□□□□ -2.18
CACNA1AO00555 MIR6513-201ENST00000621188 64 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 AC103710.2-202ENST00000641454 2853 ntBASIC1.44□□□□□ -2.18
CACNA1AO00555 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
CACNA1AO00555 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CACNA1AO00555 Y_RNA.610-201ENST00000410681 103 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 HMGN2P20-201ENST00000437531 273 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 BMI1P1-201ENST00000445879 941 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.43□□□□□ -2.18
CACNA1AO00555 AL389895.1-201ENST00000554127 252 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CACNA1AO00555 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CACNA1AO00555 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CACNA1AO00555 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CACNA1AO00555 AC092638.1-201ENST00000411966 1275 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 AC019070.1-201ENST00000415008 1024 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 LINC01347-201ENST00000417964 355 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 GTF2IP12-201ENST00000456547 356 ntBASIC1.43□□□□□ -2.18
CACNA1AO00555 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CACNA1AO00555 AC084364.2-201ENST00000546924 395 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms