Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1AO00322 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 RNU6-1261P-201ENST00000517194 104 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1AO00322 AC087373.1-201ENST00000524920 491 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC027176.1-201ENST00000560204 514 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC138915.2-201ENST00000569776 97 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC009163.5-201ENST00000575421 637 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 U73023.1-201ENST00000603134 700 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AL445435.1-201ENST00000604232 665 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC107308.1-201ENST00000615897 301 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC018926.1-201ENST00000616335 435 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC011330.2-201ENST00000621680 635 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1AO00322 AC004009.2-201ENST00000623016 728 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC090772.4-201ENST00000623599 362 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AC010872.1-201ENST00000624225 675 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AL160394.1-201ENST00000624765 724 ntBASIC2.23□□□□□ -2.05
UPK1AO00322 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1AO00322 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.23□□□□□ -2.05
UPK1AO00322 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
UPK1AO00322 AC138915.1-201ENST00000565427 1685 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 Y_RNA.110-201ENST00000363220 99 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 RNU5B-4P-201ENST00000363508 111 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 U3.12-201ENST00000364498 214 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
UPK1AO00322 AL031679.1-201ENST00000400616 525 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AL356131.1-201ENST00000405826 414 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1AO00322 MTATP6P27-201ENST00000416987 621 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC234781.2-201ENST00000426370 994 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC092634.2-201ENST00000428146 1010 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1AO00322 MTCYBP11-201ENST00000447254 1109 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 RPL39P6-201ENST00000448289 150 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC234775.1-201ENST00000454247 670 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 MTCO3P11-201ENST00000455103 774 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 PNPLA4P1-201ENST00000458328 305 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC026410.2-201ENST00000460281 156 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 RPS15AP17-201ENST00000470598 390 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1AO00322 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC008837.1-201ENST00000511513 412 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1AO00322 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.22□□□□□ -2.05
UPK1AO00322 AP003355.1-201ENST00000518956 587 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC103783.1-201ENST00000520506 373 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 CASP1P1-201ENST00000526345 212 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 MTCO3P15-201ENST00000526563 574 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC087894.1-201ENST00000538359 518 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1AO00322 MIR5708-201ENST00000579723 85 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC105224.1-201ENST00000587055 421 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC103810.6-201ENST00000606708 136 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AL161734.1-201ENST00000609720 557 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC073592.7-201ENST00000623659 507 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1AO00322 AC099654.7-201ENST00000635788 2127 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 MKKS-204ENST00000639674 192 ntBASIC2.22□□□□□ -2.05
UPK1AO00322 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1AO00322 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
UPK1AO00322 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
UPK1AO00322 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
UPK1AO00322 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
UPK1AO00322 OR5H15-201ENST00000383696 930 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
UPK1AO00322 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.21□□□□□ -2.06
UPK1AO00322 MTND1P23-201ENST00000416931 372 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AL513477.1-202ENST00000417061 214 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 CCDC58P2-201ENST00000417131 366 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 HMGN2P30-201ENST00000423237 256 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 RPL7L1P10-201ENST00000427790 463 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 WARS2P1-201ENST00000429678 537 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.21□□□□□ -2.06
UPK1AO00322 AC005297.2-201ENST00000450430 606 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1AO00322 AC104435.1-201ENST00000483483 166 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
UPK1AO00322 RPL30P5-201ENST00000494923 336 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC022483.1-201ENST00000514020 567 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1AO00322 AC109329.2-201ENST00000519658 482 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AP000889.2-201ENST00000532684 490 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AC125611.1-201ENST00000549563 229 ntBASIC2.21□□□□□ -2.06
UPK1AO00322 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1AO00322 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.21□□□□□ -2.06
UPK1AO00322 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms