Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC040168.1-201ENST00000623594 991 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR7157-201ENST00000635801 60 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 ABBA01000935.2-201ENST00000637477 838 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU1-62P-201ENST00000362599 164 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 SNORA8-201ENST00000384574 139 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC010385.1-201ENST00000412374 256 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC009237.2-201ENST00000421358 284 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AL158156.1-201ENST00000422509 473 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC004865.1-201ENST00000442276 1003 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AL357134.1-201ENST00000445848 426 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 RPL12P25-201ENST00000455592 494 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC104164.3-201ENST00000467363 1258 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC080014.1-201ENST00000496877 1201 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AL160236.1-201ENST00000556317 195 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC074050.1-201ENST00000563247 211 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR3921-201ENST00000577308 85 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC024220.1-201ENST00000603675 484 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AL022099.1-201ENST00000604551 712 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC068276.1-201ENST00000605793 379 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC091304.6-201ENST00000619761 202 ntBASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CHKB-CPT1BH3BT56 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU6-1083P-201ENST00000384022 107 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR518C-201ENST00000384822 101 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 SNORA48.7-201ENST00000391302 135 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 NPM1P10-201ENST00000398310 865 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU2-20P-201ENST00000410425 191 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 Z85995.1-201ENST00000415547 335 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC092017.2-201ENST00000427600 362 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC105272.1-201ENST00000438604 198 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AL135938.1-201ENST00000443141 297 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AL096803.2-201ENST00000450032 677 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AP001992.1-205ENST00000462248 379 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 RN7SL636P-201ENST00000497504 294 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC025459.1-201ENST00000504072 156 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 RN7SKP157-201ENST00000516174 282 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 RNA5SP137-201ENST00000516833 135 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 SCARNA3-201ENST00000517097 143 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC022616.2-201ENST00000523185 300 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 MTCYBP27-201ENST00000555160 670 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC087465.1-201ENST00000560574 245 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC008269.2-201ENST00000561915 1105 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC022254.1-201ENST00000567857 235 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC079791.1-201ENST00000605356 973 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC103810.8-201ENST00000607347 118 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC012150.2-201ENST00000621300 544 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AL356863.1-201ENST00000623378 1080 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC02211-204ENST00000642024 1070 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC0.97□□□□□ -2.25
CHKB-CPT1BH3BT56 MTND5P1-201ENST00000445440 1375 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms