Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC079228.1-201ENST00000624774 1049 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 MIR7515-201ENST00000637837 67 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 AC009093.8-201ENST00000641769 292 ntBASIC2.18□□□□□ -2.06
SMKR1H3BMG3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 MIR122-201ENST00000385044 85 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 MTCO1P17-201ENST00000411522 491 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC023141.4-201ENST00000412031 328 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 HMGB1P49-201ENST00000418882 569 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL139281.1-201ENST00000422120 335 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 USP12PX-201ENST00000432383 1057 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC007389.2-201ENST00000434630 306 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AP000542.1-201ENST00000448473 371 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 RN7SL499P-201ENST00000481141 276 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 RPS29P20-201ENST00000489592 171 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC098799.2-201ENST00000509466 868 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC010587.2-201ENST00000511727 448 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 RNU1-95P-201ENST00000516357 160 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 RNU1-128P-201ENST00000516704 160 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 DUXAP2-201ENST00000519198 589 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL160237.3-201ENST00000604114 1013 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL121772.2-201ENST00000614331 297 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 AP000676.3-201ENST00000623299 569 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
SMKR1H3BMG3 MTND4P9-201ENST00000507819 1346 ntBASIC2.17□□□□□ -2.06
SMKR1H3BMG3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 ZNF833P-201ENST00000424938 1494 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC073325.2-201ENST00000339545 159 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RNU6-462P-201ENST00000362659 105 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RNU4-92P-201ENST00000363783 136 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 SNORA5A-201ENST00000384111 134 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AL445584.1-201ENST00000431451 330 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 Z80107.1-201ENST00000436830 412 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC092641.1-201ENST00000440229 772 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RPL39P40-201ENST00000445481 146 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 ELOCP23-201ENST00000452014 332 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC013267.1-201ENST00000458227 267 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC008481.1-201ENST00000463278 396 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 NDUFA5P9-201ENST00000472609 340 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RPS29P2-201ENST00000479278 136 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC106707.2-201ENST00000484182 374 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RPL9P33-201ENST00000484311 566 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC105252.1-201ENST00000503089 286 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AIG1P1-201ENST00000503376 148 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RNU6-927P-201ENST00000516199 100 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RNU6-390P-201ENST00000516259 103 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 SNORA31.18-201ENST00000517043 134 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 RNA5SP290-201ENST00000517133 127 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 OR5B10P-201ENST00000532869 642 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AL359212.1-201ENST00000556608 614 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC138761.3-201ENST00000579993 334 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC022662.1-201ENST00000580252 331 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 AC009269.6-201ENST00000621778 588 ntBASIC2.16□□□□□ -2.06
SMKR1H3BMG3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.16□□□□□ -2.06
SMKR1H3BMG3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms