Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYCE3A1L190 AC034268.2-201ENST00000571784 482 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 AC079089.3-201ENST00000603094 673 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 RPP40P2-201ENST00000603596 712 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 AC106052.1-201ENST00000608029 497 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 BX664608.1-201ENST00000610519 487 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 MIR7112-201ENST00000616126 65 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 AL159972.1-201ENST00000625150 448 ntBASIC3.13□□□□□ -1.91
SYCE3A1L190 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYCE3A1L190 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 OR4G2P-202ENST00000641004 1759 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SYCE3A1L190 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYCE3A1L190 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AP000776.1-201ENST00000530032 1663 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYCE3A1L190 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
SYCE3A1L190 SNORA71.3-201ENST00000362582 128 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 RNU6-637P-201ENST00000384050 107 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 RNU6-1242P-201ENST00000391052 103 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AL356421.1-201ENST00000403255 413 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AL645937.1-202ENST00000421799 937 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AL590383.1-201ENST00000428602 75 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
SYCE3A1L190 SNRPEP7-201ENST00000438350 220 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 PRDX3P3-201ENST00000447765 522 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.12□□□□□ -1.91
SYCE3A1L190 RPL27AP5-201ENST00000469428 449 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 KC877373.1-201ENST00000479066 408 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AC108729.1-201ENST00000487812 947 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AC147055.4-201ENST00000504399 745 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.12□□□□□ -1.91
SYCE3A1L190 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AC009812.2-201ENST00000517657 457 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.12□□□□□ -1.91
SYCE3A1L190 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.12□□□□□ -1.91
SYCE3A1L190 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AC124947.2-202ENST00000552735 133 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.12□□□□□ -1.91
SYCE3A1L190 MIR3908-201ENST00000579798 126 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.12□□□□□ -1.91
SYCE3A1L190 AC090186.1-201ENST00000605991 572 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.12□□□□□ -1.91
SYCE3A1L190 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.12□□□□□ -1.91
SYCE3A1L190 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYCE3A1L190 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYCE3A1L190 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYCE3A1L190 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.12□□□□□ -1.91
SYCE3A1L190 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYCE3A1L190 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYCE3A1L190 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYCE3A1L190 RNU6-744P-201ENST00000365557 107 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 RNU6-1316P-201ENST00000384242 108 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SYCE3A1L190 RNU6-754P-201ENST00000391166 107 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.11□□□□□ -1.91
SYCE3A1L190 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYCE3A1L190 SPA17P1-201ENST00000416656 452 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 HMGN2P30-201ENST00000423237 256 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AC006946.1-201ENST00000429106 328 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AC004854.1-201ENST00000440356 349 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AC093392.2-201ENST00000450682 337 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AL109741.2-201ENST00000455561 343 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AC010587.2-201ENST00000511727 448 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 SNORA74D-201ENST00000516404 141 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 RNU6-1256P-201ENST00000516539 103 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.11□□□□□ -1.91
SYCE3A1L190 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SYCE3A1L190 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.11□□□□□ -1.91
SYCE3A1L190 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.11□□□□□ -1.91
SYCE3A1L190 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SYCE3A1L190 OR5H6-203ENST00000642105 978 ntBASIC3.11□□□□□ -1.91
SYCE3A1L190 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYCE3A1L190 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYCE3A1L190 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
SYCE3A1L190 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SYCE3A1L190 RNU6-289P-201ENST00000364093 107 ntBASIC3.1□□□□□ -1.91
SYCE3A1L190 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
SYCE3A1L190 RNU6-198P-201ENST00000384258 104 ntBASIC3.1□□□□□ -1.91
SYCE3A1L190 RNU6-925P-201ENST00000384629 104 ntBASIC3.1□□□□□ -1.91
SYCE3A1L190 RNU6-114P-201ENST00000384704 105 ntBASIC3.1□□□□□ -1.91
SYCE3A1L190 RNA5SP210-201ENST00000391034 120 ntBASIC3.1□□□□□ -1.91
SYCE3A1L190 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms