Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC105914.1-201ENST00000511798 226 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PAICSP4-201ENST00000517543 1253 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP003467.2-201ENST00000520175 319 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP003122.4-201ENST00000530980 758 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP000857.1-201ENST00000532151 543 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CCNG2P1-201ENST00000549521 1000 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC005771.1-201ENST00000585581 349 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC087752.4-201ENST00000605911 462 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC007038.2-201ENST00000608095 740 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC004067.1-201ENST00000608733 700 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC090425.2-201ENST00000608818 501 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL121772.2-201ENST00000614331 297 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MIR4275-201ENST00000636486 87 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DDX10P1-201ENST00000448545 1933 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL672296.1-201ENST00000427780 2158 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNA5SP295-201ENST00000362655 121 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU5A-8P-201ENST00000364102 114 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNA5SP515-201ENST00000364570 118 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL359837.1-201ENST00000381357 287 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DEFB109C-201ENST00000382575 264 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DEFB109B-201ENST00000382656 264 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC010153.1-201ENST00000432862 727 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ATP5C1P1-201ENST00000441945 895 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 H2AFZP6-201ENST00000444403 394 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL162389.1-201ENST00000449233 177 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SNORD42A-201ENST00000459584 64 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CEACAMP10-202ENST00000495431 496 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 VN1R104P-201ENST00000505115 1009 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MTCO2P32-201ENST00000514865 403 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HMGN1P28-201ENST00000521340 364 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC009977.1-201ENST00000586015 570 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC105224.1-201ENST00000587055 421 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RSL24D1P11-201ENST00000591045 491 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC119751.7-201ENST00000600494 245 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC024941.1-201ENST00000612250 334 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 TUG1_2.1-201ENST00000614234 87 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC108479.2-201ENST00000617314 601 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL603758.1-201ENST00000618654 241 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC091903.1-201ENST00000624322 454 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 ZNF285B-201ENST00000561698 1767 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC005832.2-201ENST00000538921 1430 ntBASIC3.01□□□□□ -1.93
TRBV4-1A0A0J9YWV2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 DEFB108F-201ENST00000344638 222 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNA5SP124-201ENST00000362739 110 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 U3.6-201ENST00000363622 211 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 Y_RNA.201-201ENST00000364052 96 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL109755.1-201ENST00000401791 649 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP000567.1-201ENST00000406413 156 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNA5SP129-201ENST00000410276 118 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC007899.1-201ENST00000412776 775 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SYF2P2-201ENST00000417620 583 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC073063.1-201ENST00000434352 607 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 TIMM9P1-201ENST00000436122 256 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MTCO1P19-201ENST00000443487 500 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPL17P49-201ENST00000443728 411 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 USP9YP29-201ENST00000445112 563 ntBASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SSXP1-201ENST00000453640 473 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms