Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC187A0A096LP49 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC187A0A096LP49 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC187A0A096LP49 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC187A0A096LP49 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC187A0A096LP49 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC187A0A096LP49 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNU6-1155P-201ENST00000363554 107 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNU6-1090P-201ENST00000364065 94 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNA5SP387-201ENST00000364226 106 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 SNORA7.2-201ENST00000364446 145 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNU6-637P-201ENST00000384050 107 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 MIR7-3-201ENST00000384898 110 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNU6-278P-201ENST00000390945 109 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNA5SP104-201ENST00000410989 118 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 SNORA57.3-201ENST00000411095 141 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RAC1P3-201ENST00000416129 580 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 YME1L1P1-201ENST00000429435 297 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RPL21P112-201ENST00000434403 463 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC002486.1-201ENST00000435098 391 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 NOTCH2P1-201ENST00000443481 624 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 SNRPGP5-201ENST00000456003 220 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RPL36AP13-201ENST00000457490 317 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC023194.1-201ENST00000493084 308 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RPL29P14-201ENST00000495837 428 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 NIPA2P2-201ENST00000496376 1083 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC025445.1-201ENST00000502728 300 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC005921.1-201ENST00000510589 286 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC021146.1-201ENST00000511202 716 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 RNA5SP154-201ENST00000516193 111 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 HMGN1P28-201ENST00000521340 364 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC126177.3-201ENST00000551839 688 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AL133153.1-201ENST00000557756 303 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 MIR5684-201ENST00000585074 65 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC008638.3-201ENST00000603341 463 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AL590282.1-201ENST00000610379 1136 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AL020991.1-201ENST00000612314 373 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 MIR7154-201ENST00000620673 73 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AC011266.1-201ENST00000624119 3569 ntBASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
CCDC187A0A096LP49 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 RNA5SP189-201ENST00000364920 115 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 RNU6-282P-201ENST00000365357 103 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 RNY3P13-201ENST00000365542 102 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 Y_RNA.402-201ENST00000383972 102 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 RNU6-432P-201ENST00000384196 109 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 RNU6-754P-201ENST00000391166 107 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 RPS7P15-201ENST00000415804 584 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC099677.1-201ENST00000420575 175 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC007283.2-201ENST00000424739 197 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC012158.1-204ENST00000483430 465 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC093278.1-201ENST00000494700 600 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC090151.1-201ENST00000520784 730 ntBASIC3.89□□□□□ -1.79
CCDC187A0A096LP49 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms